Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 1.2e-264 916.0 471 100.0
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 4.9e-178 628.2 473 68.9
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 6.7e-167 591.3 471 64.5
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 5.3e-164 581.6 470 63.8
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 2.6e-163 579.3 474 63.1
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 1.0e-162 577.4 474 65.4
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 2.2e-162 576.2 473 63.4
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 6.5e-162 574.7 471 64.3
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 8.5e-162 574.3 458 65.3
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 1.1e-161 573.9 469 63.1
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 2.5e-161 572.8 473 63.8
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 2.5e-161 572.8 470 63.4
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 1.2e-160 570.5 470 62.8
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 2.1e-160 569.7 470 63.4
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 2.1e-160 569.7 476 63.9
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 3.6e-160 568.9 472 62.1
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 6.1e-160 568.2 471 62.8
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 1.4e-159 567.0 469 63.1
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 3.9e-159 565.5 470 62.1
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 5.1e-159 565.1 469 61.6
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 6.7e-159 564.7 469 62.9
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 2.5e-158 562.8 460 62.4
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 3.7e-157 558.9 472 60.8
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 6.3e-157 558.1 474 61.4
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 8.2e-157 557.8 470 62.3
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.1e-156 557.4 471 62.2
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 2.4e-156 556.2 472 63.1
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 4.1e-156 555.4 471 62.2
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 6.9e-156 554.7 478 62.1
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 9.1e-156 554.3 472 60.4
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.2e-155 553.9 471 61.8
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 3.4e-155 552.4 456 61.4
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 4.5e-155 552.0 469 63.1
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 6.5e-154 548.1 453 61.6
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 3.2e-153 545.8 462 62.1
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 3.6e-152 542.3 472 61.4
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 6.1e-152 541.6 475 59.4
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 1.8e-151 540.0 481 60.5
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 1.8e-151 540.0 475 59.6
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 1.1e-150 537.3 473 63.4
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 1.5e-150 537.0 467 60.0
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 2.0e-150 536.6 478 57.7
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 2.0e-150 536.6 477 57.4
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 2.2e-149 533.1 471 58.6
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 2.2e-149 533.1 473 59.2
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 3.7e-149 532.3 574 51.9
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 4.8e-149 531.9 465 60.2
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 1.1e-148 530.8 473 59.0
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.4e-148 530.4 481 57.0
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 4.1e-148 528.9 464 58.8
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 7.0e-148 528.1 475 58.7
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 1.5e-147 526.9 480 58.5
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 1.5e-147 526.9 434 61.5
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 2.0e-147 526.6 473 59.0
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 2.0e-147 526.6 523 55.8
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 3.4e-147 525.8 469 59.5
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 4.5e-147 525.4 471 58.4
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 4.5e-147 525.4 508 55.1
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 1.0e-146 524.2 472 58.3
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 3.8e-146 522.3 469 59.1
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 6.5e-146 521.5 399 67.2
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 1.1e-145 520.8 468 58.5
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 9.4e-145 517.7 471 57.7
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 1.6e-144 516.9 476 58.2
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 2.7e-144 516.2 490 56.5
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 2.7e-144 516.2 469 57.6
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 3.6e-144 515.8 481 57.2
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 2.3e-143 513.1 491 55.8
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 5.2e-143 511.9 478 56.3
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 6.7e-143 511.5 470 57.2
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 8.8e-143 511.1 473 57.5
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 1.5e-142 510.4 492 56.7
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 2.4e-140 503.1 408 63.2
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 4.1e-140 502.3 471 56.5
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 1.6e-139 500.4 483 56.5
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 2.0e-139 500.0 390 66.7
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 2.6e-139 499.6 459 56.0
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.3e-138 497.3 453 56.5
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 3.8e-138 495.7 460 55.9
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 1.4e-135 487.3 371 66.6
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 6.3e-133 478.4 447 56.4
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 2.4e-132 476.5 442 57.0
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 1.3e-130 470.7 489 53.2
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 6.5e-130 468.4 453 56.3
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 2.1e-128 463.4 479 52.6
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 6.1e-128 461.8 472 52.1
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 2.3e-127 459.9 470 53.0
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 2.8e-125 453.0 512 49.4
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 6.3e-125 451.8 338 67.5
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 1.6e-123 447.2 379 60.7
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 5.5e-121 438.7 363 63.9
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 1.2e-120 437.6 426 54.0
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 3.5e-115 419.5 446 53.4
Prupe.7G060900 Prunus persica HOM05D005933 ORTHO05D007366 1.2e-112 411.0 322 68.3
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 8.3e-109 398.3 424 50.7
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 2.4e-108 396.7 466 48.5
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 7.0e-100 368.6 474 45.4
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 1.0e-98 364.8 352 54.3
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 1.0e-98 364.8 352 54.3
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 1.6e-96 357.5 491 42.6
Sc13g0001740 Simmondsia chinensis HOM05D005933 ORTHO05D007366 5.2e-95 352.4 297 63.6
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 7.5e-94 348.6 343 54.2
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 9.9e-94 348.2 260 68.8
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 2.1e-83 313.9 235 67.7
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 7.3e-81 305.4 222 67.6
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 6.9e-79 298.9 349 46.7
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 3.4e-78 296.6 445 43.1
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 8.7e-74 282.0 462 40.5
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 1.5e-73 281.2 458 38.0
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 2.3e-66 257.3 350 42.3
Pp3c14_19420 Physcomitrium patens HOM05D005933 ORTHO05D007366 1.1e-57 228.4 298 45.0
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 2.4e-55 220.7 233 51.9
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 3.1e-55 220.3 383 40.2
CDE02G1215 Ceratophyllum demersum HOM05D002948 ORTHO05D003577 1.2e-51 208.4 174 63.2
C07p62070 Brassica napus HOM05D005933 ORTHO05D007366 2.5e-49 200.7 161 65.2
BolC7t46624H Brassica oleracea HOM05D005933 ORTHO05D007366 2.5e-49 200.7 161 65.2
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 9.0e-47 192.2 175 60.0
CBR_g982 Chara braunii HOM05D005933 ORTHO05D007366 5.0e-45 186.4 424 31.6
Cfa017749 Carpinus fangiana HOM05D005933 ORTHO05D007366 9.4e-44 182.2 229 45.9
Cc06_g12380 Coffea canephora HOM05D005933 ORTHO05D007366 1.6e-35 154.8 198 47.0
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 1.6e-35 154.8 148 51.4
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 8.8e-34 149.1 162 52.5
TAR633G2604 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.1e-33 148.7 119 61.3
TAR636G2120 Trochodendron aralioides HOM05D005933 ORTHO05D007366 1.3e-29 135.2 118 60.2
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 5.0e-29 133.3 146 48.6
Cre01.g043500 Chlamydomonas reinhardtii HOM05D005933 ORTHO05D007366 9.1e-23 112.5 257 31.1
Dinv12483 Davidia involucrata HOM05D005933 ORTHO05D007366 4.7e-19 100.1 106 50.9
SHI32976 Sapria himalayana HOM05D000105 ORTHO05D000023 2.0e-14 84.7 110 43.6
Nn8g40508 Nelumbo nucifera HOM05D005933 ORTHO05D007366 4.5e-14 83.6 69 59.4
Nn8g40507 Nelumbo nucifera HOM05D005933 ORTHO05D007366 6.5e-13 79.7 101 46.5
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 5.2e-10 70.1 52 67.3
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 8.8e-10 69.3 52 67.3


User provided reference genes

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