Gene: Os04g0416100

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os04g0416100
  • Transcript Identifier Os04t0416100-01
  • Gene Type Coding gene
  • Location chr04 : 20551506-20554970 : negative

Gene Family Information

  • ID HOM05D001423
  • #Genes/#Species 441/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os04t0416100-01
  • MSU-ID LOC_Os04g33950.1
  • uniprot Q0JDB0

Descriptions

  • Description Similar to Transcription factor E2F1 (E2F-1) (Fragment).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IBA
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT5G22220
GO:0051446
ISO
PLAZA Integrative Orthologypositive regulation of meiotic cell cycle AT2G36010
GO:0010090
ISO
PLAZA Integrative Orthologytrichome morphogenesis AT5G22220
GO:0008284
ISO
PLAZA Integrative Orthologypositive regulation of cell population proliferation AT5G22220
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G36010
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT5G22220
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0007049
IEA
GOA Databasecell cycle

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G36010
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G22220
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000978
IBA
IEA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000978
IEA
InterProRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G22220
GO:0005667
IEA
GOA Databasetranscription regulator complex
GO:0005667
IEA
InterProtranscription regulator complex
GO:0005634
IEA
GOA Databasenucleus
GO:0090575
IBA
GOA DatabaseRNA polymerase II transcription regulator complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR015633 E2F Family
IPR036390 Winged helix DNA-binding domain superfamily
IPR003316 E2F/DP family, winged-helix DNA-binding domain
IPR032198 E2F transcription factor, CC-MB domain
IPR037241 E2F-DP heterodimerization region
Mapman id Description
13.1.2.1.4.1 Cell cycle organisation.cell cycle control.regulation.MuvB/DREAM regulatory complexes.E2F-DP dimer.component E2F
15.5.10 RNA biosynthesis.transcriptional regulation.transcription factor (E2F)