Gene: AT5G22220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G22220
  • Transcript Identifier AT5G22220.2
  • Gene Type Coding gene
  • Location Chr5 : 7360749-7364120 : positive

Gene Family Information

  • ID HOM05D001423
  • #Genes/#Species 441/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G22220.2
  • symbol E2F1
  • Alias ATE2FB,E2FB
  • uniprot Q9FV71

Descriptions

  • Description E2F transcription factor 1
  • Computational description E2F transcription factor 1 (E2F1); CONTAINS InterPro DOMAIN/s: Transcription factor E2F/dimerisation partner (TDP) (InterPro:IPR003316), Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), E2F Family (InterPro:IPR015633); BEST Arabidopsis thaliana protein match is: E2F transcription factor 3 (TAIR:AT2G36010.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0006357
IEA
InterProregulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0007049
IEA
GOA Databasecell cycle
GO:0008284
IMP
Gene Ontologypositive regulation of cell population proliferation2
GO:0010090
IMP
Gene Ontologytrichome morphogenesis3
GO:0051446
IMP
Gene Ontologypositive regulation of meiotic cell cycle4
GO:0051302
IMP
Gene Ontologyregulation of cell division4
GO:0009733
IEP
Gene Ontologyresponse to auxin4
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated5

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000978
IEA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1
GO:0000978
IEA
InterProRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
Gene OntologyDNA binding5
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity6 7
GO:0005515
IPI
Gene Ontologyprotein binding8

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090575
IBA
Gene OntologyRNA polymerase II transcription regulator complex1
GO:0005667
IEA
GOA Databasetranscription regulator complex
GO:0005667
IEA
InterProtranscription regulator complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003316 E2F/DP family, winged-helix DNA-binding domain
IPR032198 E2F transcription factor, CC-MB domain
IPR037241 E2F-DP heterodimerization region
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
IPR015633 E2F Family
Mapman id Description
13.1.2.1.4.1 Cell cycle organisation.cell cycle control.regulation.MuvB/DREAM regulatory complexes.E2F-DP dimer.component E2F
15.5.10 RNA biosynthesis.transcriptional regulation.transcription factor (E2F)