Gene: Nitab4.5_0002436g0100

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0002436g0100
  • Transcript Identifier Nitab4.5_0002436g0100.1
  • Gene Type Coding gene
  • Location Nitab4.5_0002436 : 327269-347876 : positive

Gene Family Information

  • ID HOM05D005142
  • #Genes/#Species 146/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0002436g0100.1
  • SR1-identifier Nta02g19790.1

Descriptions

  • Description D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding, NAD(P)-binding domain, D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, Nucleotidyl transferase domain, PAP/25A-associated
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071076
ISO
PLAZA Integrative OrthologyRNA 3' uridylation AT2G45620
GO:0006397
ISO
PLAZA Integrative OrthologymRNA processing AT2G45620
GO:1903705
ISO
PLAZA Integrative Orthologypositive regulation of production of siRNA involved in RNA interference AT2G45620
GO:1900369
ISO
PLAZA Integrative Orthologynegative regulation of RNA interference AT2G45620
GO:0000289
ISO
PLAZA Integrative Orthologynuclear-transcribed mRNA poly(A) tail shortening AT2G45620
GO:0060964
ISO
PLAZA Integrative Orthologyregulation of gene silencing by miRNA AT2G45620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287
IEA
InterProNAD binding
GO:0016779
IEA
InterPronucleotidyltransferase activity
GO:0050265
ISO
PLAZA Integrative OrthologyRNA uridylyltransferase activity AT2G45620
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G45620
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G45620

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002058 PAP/25A-associated
IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
IPR036291 NAD(P)-binding domain superfamily
IPR045100 TUTase nucleotidyltransferase domain
IPR043519 Nucleotidyltransferase superfamily
IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain
Mapman id Description
1.3.6.2 Photosynthesis.photorespiration.hydroxypyruvate reductase activities.non-peroxisomal hydroxypyruvate reductase (HPR)
16.9.2.9.2 RNA processing.mRNA silencing.miRNA pathway.miRNA uridylation and cytidylation.uridylyltransferase (URT1)