Gene: Lsat_1_v5_gn_5_106761

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_5_106761
  • Transcript Identifier Lsat_1_v5_gn_5_106761.2
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_5 : 226935840-226939590 : negative

Gene Family Information

  • ID HOM05D000446
  • #Genes/#Species 1165/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_5_106761.v5
  • pacid 38970141

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0045493
IEA
InterProxylan catabolic process
GO:0009627
ISO
PLAZA Integrative Orthologysystemic acquired resistance AT5G64570
GO:0031222
ISO
PLAZA Integrative Orthologyarabinan catabolic process AT5G09730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0009044
IEA
InterProxylan 1,4-beta-xylosidase activity
GO:0046556
ISO
PLAZA Integrative Orthologyalpha-L-arabinofuranosidase activity AT5G09730

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G64570
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G64570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017853 Glycoside hydrolase superfamily
IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR026891 Fibronectin type III-like domain
IPR044993 Beta-D-xylosidase
IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily
IPR013783 Immunoglobulin-like fold
IPR001764 Glycoside hydrolase, family 3, N-terminal
IPR002772 Glycoside hydrolase family 3 C-terminal domain
Mapman id Description
21.3.2.2.4.2 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)