Gene: AT5G64570

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G64570
  • Transcript Identifier AT5G64570.1
  • Gene Type Coding gene
  • Location Chr5 : 25810227-25813309 : negative

Gene Family Information

  • ID HOM05D000446
  • #Genes/#Species 1165/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G64570.1
  • symbol XYL4
  • Alias ATBXL4,ARABIDOPSIS THALIANA BETA-D-XYLOSIDASE 4
  • uniprot Q9FLG1

Descriptions

  • Description beta-D-xylosidase 4
  • Computational description beta-D-xylosidase 4 (XYL4); FUNCTIONS IN: xylan 1,4-beta-xylosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: xylan catabolic process; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-xylosidase 3 (TAIR:AT5G09730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045493
IDA
IBA
IEA
Gene Ontologyxylan catabolic process1 2
GO:0045493
IEA
InterProxylan catabolic process
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process
GO:0031222
IBA
Gene Ontologyarabinan catabolic process2
GO:0009627
IEP
Gene Ontologysystemic acquired resistance3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009044
IDA
IBA
IEA
Gene Ontologyxylan 1,4-beta-xylosidase activity1 2
GO:0009044
IEA
InterProxylan 1,4-beta-xylosidase activity
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0046556
IBA
Gene Ontologyalpha-L-arabinofuranosidase activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048046
IDA
GOA Databaseapoplast
GO:0048046
HDA
Gene Ontologyapoplast4
GO:0005618
IDA
GOA Databasecell wall
GO:0005618
HDA
Gene Ontologycell wall5
GO:0005576
IEA
GOA Databaseextracellular region
GO:0009505
IBA
Gene Ontologyplant-type cell wall2
GO:0016020
HDA
Gene Ontologymembrane6
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001764 Glycoside hydrolase, family 3, N-terminal
IPR044993 Beta-D-xylosidase
IPR026891 Fibronectin type III-like domain
IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily
IPR002772 Glycoside hydrolase family 3 C-terminal domain
IPR013783 Immunoglobulin-like fold
IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR017853 Glycoside hydrolase superfamily
Mapman id Description
21.3.2.2.4.2 Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL)