Gene: AT5G09730
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G09730
- Transcript Identifier AT5G09730.1
- Gene Type Coding gene
- Location Chr5 : 3015319-3018226 : negative
Gene Family Information
- ID HOM05D000446
- #Genes/#Species 1165/97
- Phylogenetic origin
- ID ORTHO05D000321
- #Genes/#Species 1120/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT5G09730.1
- symbol BXL3
- Alias ATBX3,ATBXL3,BETA-XYLOSIDASE 3,BX3,XYL3
- uniprot Q9LXD6
Descriptions
- Description beta-xylosidase 3
- Computational description beta-xylosidase 3 (BXL3); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 3, N-terminal (InterPro:IPR001764), Glycoside hydrolase, family 3, C-terminal (InterPro:IPR002772), Glycoside hydrolase, catalytic core (InterPro:IPR017853); BEST Arabidopsis thaliana protein match is: beta-D-xylosidase 4 (TAIR:AT5G64570.1); Has 9260 Blast hits to 8072 proteins in 1198 species: Archae - 63; Bacteria - 5600; Metazoa - 16; Fungi - 1569; Plants - 515; Viruses - 0; Other Eukaryotes - 1497 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0045493 | IEA | GOA Database | xylan catabolic process | |
GO:0045493 | IBA | Gene Ontology | xylan catabolic process | 1 |
GO:0045493 | IEA | InterPro | xylan catabolic process | |
GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
GO:0008152 | IEA | GOA Database | metabolic process | |
GO:0031222 | IDA IBA | Gene Ontology | arabinan catabolic process | 1 2 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
GO:0009044 | IEA | GOA Database | xylan 1,4-beta-xylosidase activity | |
GO:0009044 | IBA | Gene Ontology | xylan 1,4-beta-xylosidase activity | 1 |
GO:0009044 | IEA | InterPro | xylan 1,4-beta-xylosidase activity | |
GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0046556 | IEA | GOA Database | alpha-L-arabinofuranosidase activity | |
GO:0046556 | IDA IBA | Gene Ontology | alpha-L-arabinofuranosidase activity | 1 2 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005576 | IEA | GOA Database | extracellular region | |
GO:0005576 | ISM | Gene Ontology | extracellular region | |
GO:0009505 | IBA | Gene Ontology | plant-type cell wall | 1 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR017853 | Glycoside hydrolase superfamily |
IPR036881 | Glycoside hydrolase family 3 C-terminal domain superfamily |
IPR001764 | Glycoside hydrolase, family 3, N-terminal |
IPR002772 | Glycoside hydrolase family 3 C-terminal domain |
IPR044993 | Beta-D-xylosidase |
IPR013783 | Immunoglobulin-like fold |
IPR026891 | Fibronectin type III-like domain |
IPR036962 | Glycoside hydrolase, family 3, N-terminal domain superfamily |
Mapman id | Description |
---|---|
21.3.2.2.4.2 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.alpha-L-arabinofuranosidase activities.bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (BXL) |