Gene: Lsat_1_v5_gn_4_21341
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_4_21341
- Transcript Identifier Lsat_1_v5_gn_4_21341.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_4 : 31858834-31865926 : negative
Gene Family Information
- ID HOM05D003438
- #Genes/#Species 198/95
- Phylogenetic origin
- ID ORTHO05D004235
- #Genes/#Species 186/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_4_21341.v5
- pacid 38932616
Descriptions
- Description 2.2.1.9 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase / SEPHCHC synthase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009234 | IEA | InterPro | menaquinone biosynthetic process | |
| GO:0042372 | ISO | PLAZA Integrative Orthology | phylloquinone biosynthetic process | AT1G68890 |
| GO:0042550 | ISO | PLAZA Integrative Orthology | photosystem I stabilization | AT1G68890 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0030976 | IEA | InterPro | thiamine pyrophosphate binding | |
| GO:0070204 | IEA | InterPro | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity | |
| GO:0070205 | IEA | InterPro | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011766 | Thiamine pyrophosphate enzyme, C-terminal TPP-binding |
| IPR004433 | 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
| IPR036849 | Enolase-like, C-terminal domain superfamily |
| IPR029058 | Alpha/Beta hydrolase fold |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR022485 | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
| IPR000073 | Alpha/beta hydrolase fold-1 |
| IPR029017 | Enolase-like, N-terminal |
| IPR012001 | Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain |
| IPR032264 | Menaquinone biosynthesis protein MenD, middle domain |
| IPR013342 | Mandelate racemase/muconate lactonizing enzyme, C-terminal |
| IPR029065 | Enolase C-terminal domain-like |
| Mapman id | Description |
|---|---|
| 7.14.3 | Coenzyme metabolism.phylloquinone biosynthesis.multifunctional phylloquinone biosynthesis protein (PHYLLO) |