Gene: Lj5g0018135
General Information
Structural Information
- Species Lotus japonicus
- Gene Identifier Lj5g0018135
- Transcript Identifier Lj5g0018135.1
- Gene Type Coding gene
- Location chr5 : 30894783-30898197 : negative
Gene Family Information
- ID HOM05D000004
- #Genes/#Species 19584/91
- Phylogenetic origin
- ID ORTHO05D000002
- #Genes/#Species 15655/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Lj5g0018135.Lj1.0v1
- pacid 44924381
Descriptions
- Description PF00078//PF00665 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041588 | Integrase zinc-binding domain |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| IPR001584 | Integrase, catalytic core |
| IPR036397 | Ribonuclease H superfamily |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR000477 | Reverse transcriptase domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |