Gene: Lj1g0006019

General Information

Structural Information

Species Lotus japonicus
Gene Identifier Lj1g0006019
Transcript Identifier Lj1g0006019.1
Gene Type Coding gene
Location chr1 : 48081318-48100749 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002037
#Genes/#Species 325/100
Phylogenetic origin

ID ORTHO05D005261
#Genes/#Species 161/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id Lj1g0006019.Lj1.0v1
pacid 44916203

Descriptions

Short descriptions
Ortholog descriptions

Description K11789 - HIV-1 Vpr-binding protein (VPRBP, DCAF1)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016567	IEA	InterPro	protein ubiquitination
GO:0010154	ISO	PLAZA Integrative Orthology	fruit development	AT4G31160
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT4G31160
GO:0009908	ISO	PLAZA Integrative Orthology	flower development	AT4G31160
GO:0048367	ISO	PLAZA Integrative Orthology	shoot system development	AT4G31160
GO:0048366	ISO	PLAZA Integrative Orthology	leaf development	AT4G31160
GO:0048827	ISO	PLAZA Integrative Orthology	phyllome development	AT4G31160

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT4G31160
GO:0080008	ISO	PLAZA Integrative Orthology	Cul4-RING E3 ubiquitin ligase complex	AT4G31160

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036322	WD40-repeat-containing domain superfamily
IPR006594	LIS1 homology motif
IPR033270	VPRBP/DCAF1 family
IPR001680	WD40 repeat
IPR015943	WD40/YVTN repeat-like-containing domain superfamily

Mapman id	Description
35.1	not assigned.annotated