Gene: AT4G31160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G31160
  • Transcript Identifier AT4G31160.1
  • Gene Type Coding gene
  • Location Chr4 : 15145936-15152939 : positive

Gene Family Information

  • ID HOM05D002037
  • #Genes/#Species 325/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G31160.1
  • symbol DCAF1
  • uniprot Q9M086

Descriptions

  • Description DDB1-CUL4 associated factor 1
  • Computational description DDB1-CUL4 associated factor 1 (DCAF1); FUNCTIONS IN: nucleotide binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus, CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594); Has 5754 Blast hits to 3482 proteins in 410 species: Archae - 46; Bacteria - 1277; Metazoa - 1225; Fungi - 769; Plants - 278; Viruses - 87; Other Eukaryotes - 2072 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy1
GO:0009908
IMP
Gene Ontologyflower development1
GO:0010154
IMP
Gene Ontologyfruit development1
GO:0048366
IMP
Gene Ontologyleaf development1
GO:0048367
IMP
Gene Ontologyshoot system development1
GO:0048827
IMP
Gene Ontologyphyllome development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
IBA
Gene Ontologynucleus1 2
GO:0080008
IPI
IBA
Gene OntologyCul4-RING E3 ubiquitin ligase complex1 2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR033270 VPRBP/DCAF1 family
IPR036322 WD40-repeat-containing domain superfamily
IPR006594 LIS1 homology motif
Mapman id Description
35.1 not assigned.annotated