Gene: Haze_07738
General Information
Structural Information
- Species Corylus avellana
- Gene Identifier Haze_07738
- Transcript Identifier Haze_07738-RA
- Gene Type Coding gene
- Location 4 : 6353094-6363399 : negative
Gene Family Information
- ID HOM05D000622
- #Genes/#Species 916/100
- Phylogenetic origin
- ID ORTHO05D000475
- #Genes/#Species 879/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Haze_07738-RA
Descriptions
- Description Similar to NTF2: Nuclear transport factor 2 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT5G60980 |
| GO:0090332 | ISO | PLAZA Integrative Orthology | stomatal closure | AT5G48650 |
| GO:1900425 | ISO | PLAZA Integrative Orthology | negative regulation of defense response to bacterium | AT5G48650 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G60980 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT5G60980 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G60980 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G07250 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G48650 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G48650 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR035979 | RNA-binding domain superfamily |
| IPR018222 | Nuclear transport factor 2, eukaryote |
| IPR000504 | RNA recognition motif domain |
| IPR039539 | Ras GTPase-activating protein-binding protein |
| IPR032710 | NTF2-like domain superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR002075 | Nuclear transport factor 2 |
| Mapman id | Description |
|---|---|
| 16.8.1 | RNA processing.mRNA sequestration.mRNA endoribonuclease (G3BP) |