Gene: Gohir.D06G019100
General Information
Structural Information
- Species Gossypium hirsutum
- Gene Identifier Gohir.D06G019100
- Transcript Identifier Gohir.D06G019100.1
- Gene Type Coding gene
- Location D06 : 2097121-2100324 : negative
Gene Family Information
- ID HOM05D001181
- #Genes/#Species 527/99
- Phylogenetic origin
- ID ORTHO05D001678
- #Genes/#Species 371/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Gohir.D06G019100.v2.1
- pacid 42387667
Descriptions
- Description K00058 - D-3-phosphoglycerate dehydrogenase (serA, PHGDH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006564 | IEA | InterPro | L-serine biosynthetic process | |
| GO:0009643 | ISO | PLAZA Integrative Orthology | photosynthetic acclimation | AT3G19480 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016616 | IEA | InterPro | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
| GO:0051287 | IEA | InterPro | NAD binding | |
| GO:0004617 | IEA | InterPro | phosphoglycerate dehydrogenase activity | |
| GO:0003954 | ISO | PLAZA Integrative Orthology | NADH dehydrogenase activity | AT3G19480 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G17745 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G19480 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G17745 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G19480 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G19480 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G17745 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006139 | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain |
| IPR029009 | Allosteric substrate binding domain superfamily |
| IPR006140 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain |
| IPR036291 | NAD(P)-binding domain superfamily |
| IPR006236 | D-3-phosphoglycerate dehydrogenase |
| IPR002912 | ACT domain |
| Mapman id | Description |
|---|---|
| 4.1.4.1.1 | Amino acid metabolism.biosynthesis.serine family.non-photorespiratory serine.phosphoglycerate dehydrogenase |