Gene: FvH4_6g18062
General Information
Structural Information
- Species Fragaria vesca
- Gene Identifier FvH4_6g18062
- Transcript Identifier FvH4_6g18062.t1
- Gene Type Coding gene
- Location Fvb6 : 11863041-11868663 : negative
Gene Family Information
- ID HOM05D000014
- #Genes/#Species 7439/72
- Phylogenetic origin
- ID ORTHO05D000093
- #Genes/#Species 2188/47
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id FvH4_6g18062.v4.0.a2
- pacid 50651832
Descriptions
- Description PF00078//PF00665//PF03732 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015074 | IEA | InterPro | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR005162 | Retrotransposon gag domain |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR000477 | Reverse transcriptase domain |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR041373 | Reverse transcriptase, RNase H-like domain |
| IPR041588 | Integrase zinc-binding domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR001584 | Integrase, catalytic core |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |