Gene: FvH4_4g13341
General Information
Structural Information
- Species Fragaria vesca
- Gene Identifier FvH4_4g13341
- Transcript Identifier FvH4_4g13341.t1
- Gene Type Coding gene
- Location Fvb4 : 16960965-16965530 : positive
Gene Family Information
- ID HOM05D000004
- #Genes/#Species 19584/91
- Phylogenetic origin
- ID ORTHO05D000002
- #Genes/#Species 15655/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id FvH4_4g13341.v4.0.a2
- pacid 50687685
Descriptions
- Description PF00078//PF00665//PF03732//PF08284 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Integrase core domain (rve) // Retrotransposon gag protein (Retrotrans_gag) // Retroviral aspartyl protease (RVP_2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR036397 | Ribonuclease H superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR041588 | Integrase zinc-binding domain |
| IPR001878 | Zinc finger, CCHC-type |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| IPR005162 | Retrotransposon gag domain |
| IPR016197 | Chromo-like domain superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR000477 | Reverse transcriptase domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |