Gene: FAN12G3766
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN12G3766
- Transcript Identifier FAN12G3766.1
- Gene Type Coding gene
- Location Fvb4-3 : 15145734-15163783 : negative
Gene Family Information
- ID HOM05D000234
- #Genes/#Species 1784/99
- Phylogenetic origin
- ID ORTHO05D001258
- #Genes/#Species 445/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb4-3-snap-gene-151.46.v1.0.a1
- pacid 50475751
Descriptions
- Description PF00646//PF02170//PF02171//PF07734//PF08268//PF08699//PF16486//PF16488 - F-box domain (F-box) // PAZ domain (PAZ) // Piwi domain (Piwi) // F-box associated (FBA_1) // F-box associated domain (FBA_3) // Argonaute linker 1 domain (ArgoL1) // N-terminal domain of argonaute (ArgoN) // Argonaute linker 2 domain (ArgoL2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR017451 | F-box associated interaction domain |
| IPR036397 | Ribonuclease H superfamily |
| IPR001810 | F-box domain |
| IPR003100 | PAZ domain |
| IPR036047 | F-box-like domain superfamily |
| IPR032474 | Protein argonaute, N-terminal |
| IPR006527 | F-box associated domain, type 1 |
| IPR003165 | Piwi domain |
| IPR036085 | PAZ domain superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR032472 | Argonaute linker 2 domain |
| IPR013187 | F-box associated domain, type 3 |
| IPR014811 | Argonaute, linker 1 domain |
| Mapman id | Description |
|---|---|
| 12.5.1.13 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.siRNA-integrating factor (AGO) |
| 19.2.2.8.1.4.3 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (FBX) |