Gene: Cfa016860
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa016860
- Transcript Identifier Cfa016860.t1
- Gene Type Coding gene
- Location Cfa07 : 4436995-4465100 : positive
Gene Family Information
- ID HOM05D000228
- #Genes/#Species 1809/100
- Phylogenetic origin
- ID ORTHO05D005112
- #Genes/#Species 164/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Cfa016860.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0008270 | IEA | InterPro | zinc ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G57660 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G57660 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007066 | RNA polymerase Rpb1, domain 3 |
| IPR007083 | RNA polymerase Rpb1, domain 4 |
| IPR042102 | RNA polymerase Rpb1, domain 3 superfamily |
| IPR015699 | DNA-directed RNA pol I, largest subunit |
| IPR000722 | RNA polymerase, alpha subunit |
| IPR006592 | RNA polymerase, N-terminal |
| IPR007080 | RNA polymerase Rpb1, domain 1 |
| IPR007081 | RNA polymerase Rpb1, domain 5 |
| IPR038120 | RNA polymerase Rpb1, funnel domain superfamily |
| IPR044893 | RNA polymerase Rpb1, clamp domain superfamily |
| Mapman id | Description |
|---|---|
| 15.1.1.1 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic components.subunit 1 |