Gene: Cc05_g02730
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc05_g02730
- Transcript Identifier Cc05_g02730.1
- Gene Type Coding gene
- Location chr5 : 12039961-12045923 : negative
Gene Family Information
- ID HOM05D000234
- #Genes/#Species 1784/99
- Phylogenetic origin
- ID ORTHO05D001258
- #Genes/#Species 445/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB Q9SDG8
- UniProtKB Q6YSJ5
- UniProtKB O48771
- UniProtKB F6HIF3
- UniProtKB B9T7B0
- UniProtKB B9IAL0
- id GSCOCG00020892001
Descriptions
- Description Protein argonaute 16
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006306 | ISO | PLAZA Integrative Orthology | DNA methylation | AT2G32940 |
| GO:0031047 | ISO | PLAZA Integrative Orthology | gene silencing by RNA | Solyc07g049500.3 |
| GO:0051607 | ISO | PLAZA Integrative Orthology | defense response to virus | AT2G32940 |
| GO:0006342 | ISO | PLAZA Integrative Orthology | chromatin silencing | AT2G32940 |
| GO:0030422 | ISO | PLAZA Integrative Orthology | production of siRNA involved in RNA interference | AT2G32940 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0035197 | ISO | PLAZA Integrative Orthology | siRNA binding | AT2G32940 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G32940 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.5.1.13 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.siRNA-integrating factor (AGO) |