Gene: Carub.0006s1217

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s1217
  • Transcript Identifier Carub.0006s1217.1
  • Gene Type Coding gene
  • Location scaffold_6 : 4538247-4543933 : positive

Gene Family Information

  • ID HOM05D000877
  • #Genes/#Species 679/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s1217.v1.1
  • pacid 39247102
  • synonym Carubv10002909m.g

Descriptions

  • Description K01191 - alpha-mannosidase (E3.2.1.24)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006013
IEA
InterPromannose metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0030246
IEA
InterProcarbohydrate binding
GO:0004559
IEA
InterProalpha-mannosidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G13980
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G13980
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G13980
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G13980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011013 Galactose mutarotase-like domain superfamily
IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily
IPR011682 Glycosyl hydrolase family 38, C-terminal
IPR000602 Glycoside hydrolase family 38, N-terminal domain
IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR037094 Glycoside hydrolase family 38, central domain superfamily
IPR015341 Glycoside hydrolase family 38, central domain
IPR041147 Glycosyl hydrolases family 38, C-terminal beta sandwich domain
IPR028995 Glycoside hydrolase families 57/38, central domain superfamily
IPR013780 Glycosyl hydrolase, all-beta
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase