Gene: CSS0026600
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0026600
- Transcript Identifier CSS0026600.1
- Gene Type Coding gene
- Location Chr13 : 107387555-107391165 : negative
Gene Family Information
- ID HOM05D001181
- #Genes/#Species 527/99
- Phylogenetic origin
- ID ORTHO05D001678
- #Genes/#Species 371/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0026600.1
Descriptions
- Description PREDICTED: D-3-phosphoglycerate dehydrogenase 3, chloroplastic [Nelumbo nucifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006564 | IEA | InterPro | L-serine biosynthetic process | |
GO:0000096 | ISO | PLAZA Integrative Orthology | sulfur amino acid metabolic process | AT4G34200 |
GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G34200 |
GO:0009561 | ISO | PLAZA Integrative Orthology | megagametogenesis | AT4G34200 |
GO:0009643 | ISO | PLAZA Integrative Orthology | photosynthetic acclimation | AT3G19480 |
GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT4G34200 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0004617 | IEA | InterPro | phosphoglycerate dehydrogenase activity | |
GO:0051287 | IEA | InterPro | NAD binding | |
GO:0016616 | IEA | InterPro | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | |
GO:0005524 | ISO | PLAZA Integrative Orthology | ATP binding | AT4G34200 |
GO:0003954 | ISO | PLAZA Integrative Orthology | NADH dehydrogenase activity | AT3G19480 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G19480 |
GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G19480 |
GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G19480 |
GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT4G34200 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR029009 | Allosteric substrate binding domain superfamily |
IPR036291 | NAD(P)-binding domain superfamily |
IPR006236 | D-3-phosphoglycerate dehydrogenase |
IPR006140 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain |
IPR006139 | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain |
IPR015878 | S-adenosyl-L-homocysteine hydrolase, NAD binding domain |
Mapman id | Description |
---|---|
4.1.4.1.1 | Amino acid metabolism.biosynthesis.serine family.non-photorespiratory serine.phosphoglycerate dehydrogenase |