Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0000182 unnamed protein product [Coffea canephora] Contig171 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G140 LG-6 + View
Acer truncatum Atru.chr9.1284 chr9 + View
Actinidia chinensis Actinidia14412 Lachesis_group6 - View
Actinidia chinensis Actinidia02147 Lachesis_group23 - View
Arabidopsis lyrata AL7G37310 scaffold_7 - View
Avicennia marina MSTRG.12118 ScioBoG_17730_HRSCAF_17811 - View
Arabidopsis thaliana AT4G17410 DWNN domain, a CCHC-type zinc finger DWNN domain%2C a CCHC-type zinc finger%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: sperm cell%2C cultured cell%3B CONTAINS InterPro DOMAIN/s: DWNN domain (InterPro:IPR014891)%3B BEST Arabidopsis thaliana protein match is: DWNN domain%2C a CCHC-type zinc finger (TAIR:AT5G47430.1)%3B Has 9457 Blast hits to 6950 proteins in 351 species: Archae - 2%3B Bacteria - 103%3B Metazoa - 5659%3B Fungi - 1428%3B Plants - 824%3B Viruses - 57%3B Other Eukaryotes - 1384 (source: NCBI BLink). DWNN domain%2C a CCHC-type zinc finger%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: sperm cell%3B CONTAINS InterPro DOMAIN/s: DWNN domain (InterPro:IPR014891)%3B BEST Arabidopsis thaliana protein match is: DWNN domain%2C a CCHC-type zinc finger (TAIR:AT5G47430.1). Chr4 + View
Brassica carinata BcaNung00096 Contig74 - View
Brassica carinata BcaC09g50468 ChrC09 + View
Brassica napus A01p20000 A01 - View
Brassica oleracea BolC1t02460H C1 - View
Brassica rapa BraA01t01923Z A01 - View
Beta vulgaris EL10Ac5g12361 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) Chr5_EL10_PGA_scaffold2 + View
Cannabis sativa CANSAT21G1233 NC_044374.1 + View
Cicer arietinum L. Ca_21976_v3 Ca_LG7_v3 - View
Corylus avellana Haze_07948 Similar to At5g47430: E3 ubiquitin ligase PQT3-like (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc08_g12210 DWNN domain, a CCHC-type zinc finger chr8 + View
Citrus clementina Ciclev10018818m.g scaffold_3 + View
Cardamine hirsuta CARHR224010 Retinoblastoma-binding protein, putative Chr7 + View
Carica papaya Cpa.g.sc29.189 supercontig_29 - View
Chenopodium quinoa AUR62007108 RBBP6: E3 ubiquitin-protein ligase RBBP6 C_Quinoa_Scaffold_1971 - View
Chenopodium quinoa AUR62019970 Rbbp6: E3 ubiquitin-protein ligase RBBP6 C_Quinoa_Scaffold_1480 - View
Capsella rubella Carub.0007s2401 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) scaffold_7 - View
Daucus carota DCAR_008503 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_027767 hypothetical protein DCARv2_Chr8 - View
Davidia involucrata Dinv21651 GWHABJS00000017 - View
Davidia involucrata Dinv39163 GWHABJS00000003 - View
Durio zibethinus Duzib068G0483 NW_019167838.1 + View
Durio zibethinus Duzib205G1336 NW_019168381.1 + View
Erigeron canadensis ECA240G4211 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.E00408 Chr05 + View
Erythranthe guttata Migut.A01126 scaffold_1 - View
Eutrema salsugineum Thhalv10024408m.g K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) scaffold_1 - View
Fragaria x ananassa FAN18G4043 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) Fvb5-1 - View
Fragaria x ananassa FAN08G2557 PTHR15439//PTHR15439:SF7 - RETINOBLASTOMA-BINDING PROTEIN 6 // DWNN DOMAIN-CONTAINING PROTEIN Fvb5-3 + View
Fragaria x ananassa FAN13G1831 PTHR15439:SF7 - DWNN DOMAIN-CONTAINING PROTEIN Fvb5-2 - View
Fragaria x ananassa FAN04G1005 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) Fvb5-4 - View
Fragaria vesca FvH4_5g19330 PTHR15439//PTHR15439:SF7 - RETINOBLASTOMA-BINDING PROTEIN 6 // DWNN DOMAIN-CONTAINING PROTEIN Fvb5 - View
Gossypium hirsutum Gohir.D08G187300 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) D08 + View
Gossypium hirsutum Gohir.A12G215700 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) A12 + View
Gossypium hirsutum Gohir.D12G218300 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) D12 + View
Gossypium hirsutum Gohir.A08G168800 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) A08 + View
Glycine max Glyma.17G143300 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) Gm17 - View
Glycine max Glyma.05G061500 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) Gm05 - View
Gossypium raimondii Gorai.008G233900 Chr08 + View
Gossypium raimondii Gorai.004G197000 Chr04 + View
Helianthus annuus HanXRQChr13g0417821 Probable DWNN domain, a CCHC-type zinc finger HanXRQChr13 + View
Helianthus annuus HanXRQChr03g0088821 Probable DWNN domain, a CCHC-type zinc finger HanXRQChr03 - View
Hydrangea macrophylla Hma1.2p1_0316F.1_g122910 Hma1.2p1_0316F.1 + View
Lupinus albus Lalb_Chr05g0221181 PTHR15439:SF7 - DWNN DOMAIN-CONTAINING PROTEIN Lalb_Chr05 + View
Lupinus albus Lalb_Chr16g0386791 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) Lalb_Chr16 - View
Lupinus albus Lalb_Chr09g0329991 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) Lalb_Chr09 + View
Lotus japonicus Lj4g0017155 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) chr4 - View
Lonicera japonica Lj8A268G24 GWHAAZE00000008 - View
Lonicera japonica Lj2A222G48 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_6_92441 Lsat_1_v8_lg_6 + View
Malus domestica MD04G1061900 DWNN domain Chr04 + View
Malus domestica MD06G1055600 DWNN domain Chr06 + View
Manihot esculenta Manes.01G082800 Chromosome01 - View
Medicago truncatula Medtr4g100750 DWNN domain, A CCHC-type zinc finger protein chr4 + View
Olea europaea Oeu040208.1 chr19 - View
Punica granatum PGR042G3434 NC_045130.1 + View
Prunus persica Prupe.5G066400 Pp05 - View
Populus trichocarpa Potri.001G156000 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) Chr01 + View
Populus trichocarpa Potri.003G078800 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) Chr03 - View
Phaseolus vulgaris Phvul.003G221275 PTHR15439 - RETINOBLASTOMA-BINDING PROTEIN 6 Chr03 + View
Quercus lobata QL12p011564 12 + View
Rosa chinensis RcHm_v2.0_Chr7g0203801 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0110400 chr07 - View
Striga asiatica SGA_v2.0_scaffold104G30173 scaffold104 - View
Striga asiatica SGA_v2.0_scaffold199G41180 scaffold199 - View
Salix brachista Sabra03G0048900 GWHAAZH00000003 - View
Salix brachista Sabra01G0134900 GWHAAZH00000001 - View
Simmondsia chinensis Sc22g0000970 GWHAASQ00000022 - View
Simmondsia chinensis Sc01g0008310 GWHAASQ00000001 + View
Schrenkiella parvula Sp7g16790 K10624 - E3 ubiquitin-protein ligase RBBP6 [EC:6.3.2.19] (RBBP6) ch7-4 - View
Selenicereus undatus Hund14574 Scaffold_33677 - View
Trochodendron aralioides TAR636G2655 group1 - View
Trochodendron aralioides TAR629G3140 group0 + View
Theobroma cacao Thecc.03G248600 DWNN domain Chromosome_3 + View
Tarenaya hassleriana THA.LOC104798367 E3 ubiquitin-protein ligase RBBP6 NW_010967966.1 + View
Tarenaya hassleriana THA.LOC104814469 uncharacterized protein LOC104814469 isoform X1 NW_010965451.1 + View
Tripterygium wilfordii TWI81G0262 NC_052251.1 + View
Vaccinium macrocarpon vmacro14069 Similar to At5g47430: E3 ubiquitin ligase PQT3-like (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro00186 Similar to At5g47430: E3 ubiquitin ligase PQT3-like (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G3547 CM024069.1 - View