Gene: COL.COLO4_11580

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_11580
  • Transcript Identifier COL.rna10373
  • Gene Type Coding gene
  • Location AWUE01014716.1 : 21498-22543 : positive

Gene Family Information

  • ID HOM05D000049
  • #Genes/#Species 4493/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna10373
  • GenBank OMP01795.1
  • id gene11552
  • gene_name COLO4_11580
  • uniprot A0A1R3K3Y0

Descriptions

  • Description Small GTPase superfamily, Rab type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT3G49860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G49870
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G67560
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G49870
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G49870
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G49870
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G67560
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT5G67560
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G49870

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005225 Small GTP-binding protein domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR044154 ADP-ribosylation factor-like protein 8A/8B
IPR006689 Small GTPase superfamily, ARF/SAR type
Mapman id Description
26.11.2.4 External stimuli response.virus.tobamovirus multiplication.small GTPase (ARL8)