Gene: AT3G49870
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G49870
- Transcript Identifier AT3G49870.2
- Gene Type Coding gene
- Location Chr3 : 18492674-18493518 : negative
Gene Family Information
- ID HOM05D000049
- #Genes/#Species 4493/100
- Phylogenetic origin
- ID ORTHO05D001680
- #Genes/#Species 370/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G49870.2
- symbol ARLA1C
- Alias ATARLA1C,ADP-ribosylation factor-like A1C
- uniprot Q8VY57
Descriptions
- Description ADP-ribosylation factor-like A1C
- Computational description ADP-ribosylation factor-like A1C (ARLA1C); FUNCTIONS IN: GTP binding; LOCATED IN: nucleus, plasma membrane, vacuole, cytoplasm; EXPRESSED IN: male gametophyte, cultured cell, callus, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1D (TAIR:AT5G67560.1); Has 19452 Blast hits to 19446 proteins in 945 species: Archae - 22; Bacteria - 898; Metazoa - 8888; Fungi - 2713; Plants - 2635; Viruses - 3; Other Eukaryotes - 4293 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007049 | IEA | GOA Database | cell cycle | |
| GO:0007059 | IEA | GOA Database | chromosome segregation | |
| GO:0051301 | IEA | GOA Database | cell division | |
| GO:0015031 | IEA | Gene Ontology | protein transport | |
| GO:0015031 | IEA | InterPro | protein transport | |
| GO:0051607 | IGI | Gene Ontology | defense response to virus | 1 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0005525 | ISS | Gene Ontology | GTP binding | 2 |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IEA | Gene Ontology | GTPase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | IDA | GOA Database | cytosol | |
| GO:0009506 | IDA | GOA Database | plasmodesma | |
| GO:0009506 | HDA | Gene Ontology | plasmodesma | 3 |
| GO:0005737 | IDA IEA | GOA Database | cytoplasm | |
| GO:0005737 | HDA | Gene Ontology | cytoplasm | 4 |
| GO:0005634 | IDA | GOA Database | nucleus | |
| GO:0005634 | HDA | Gene Ontology | nucleus | 4 |
| GO:0005856 | IEA | GOA Database | cytoskeleton | |
| GO:0005768 | IEA | GOA Database | endosome | |
| GO:0005886 | IDA | GOA Database | plasma membrane | |
| GO:0005886 | HDA | Gene Ontology | plasma membrane | 5 |
| GO:0005764 | IEA | GOA Database | lysosome | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0005794 | IDA | GOA Database | Golgi apparatus | |
| GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 6 |
| GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 7 |
| GO:0005774 | IDA | GOA Database | vacuolar membrane | |
| GO:0005774 | IBA | Gene Ontology | vacuolar membrane | 8 |
| GO:0031902 | IEA | GOA Database | late endosome membrane | |
| GO:0005819 | IEA | GOA Database | spindle | |
| GO:0005765 | IEA | GOA Database | lysosomal membrane | |
| GO:0005773 | IDA | GOA Database | vacuole |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 26.11.2.4 | External stimuli response.virus.tobamovirus multiplication.small GTPase (ARL8) |