Gene: AT3G49860

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G49860
  • Transcript Identifier AT3G49860.1
  • Gene Type Coding gene
  • Location Chr3 : 18491261-18492165 : negative

Gene Family Information

  • ID HOM05D000049
  • #Genes/#Species 4493/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G49860.1
  • symbol ARLA1B
  • Alias ATARLA1B,ADP-ribosylation factor-like A1B
  • uniprot F4IZ82

Descriptions

  • Description ADP-ribosylation factor-like A1B
  • Computational description ADP-ribosylation factor-like A1B (ARLA1B); FUNCTIONS IN: GTP binding; INVOLVED IN: intracellular protein transport, protein transport, small GTPase mediated signal transduction; LOCATED IN: intracellular; EXPRESSED IN: hypocotyl, male gametophyte, root, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ADP-ribosylation factor (InterPro:IPR006688), Small GTP-binding protein (InterPro:IPR005225), Ras small GTPase, Rab type (InterPro:IPR003579), Small GTPase SAR1-type (InterPro:IPR006687), Ras small GTPase, Ras type (InterPro:IPR003577), ARF/SAR superfamily (InterPro:IPR006689); BEST Arabidopsis thaliana protein match is: ADP-ribosylation factor-like A1C (TAIR:AT3G49870.1); Has 16899 Blast hits to 16895 proteins in 575 species: Archae - 10; Bacteria - 254; Metazoa - 7961; Fungi - 2407; Plants - 2569; Viruses - 3; Other Eukaryotes - 3695 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007049
IEA
GOA Databasecell cycle
GO:0015031
IEA
Gene Ontologyprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0051301
IEA
GOA Databasecell division
GO:0007059
IEA
GOA Databasechromosome segregation
GO:0051607
IGI
Gene Ontologydefense response to virus1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
Gene OntologyGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
ISS
Gene OntologyGTP binding2
GO:0005525
IEA
InterProGTP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0016020
IEA
GOA Databasemembrane
GO:0005764
IEA
GOA Databaselysosome
GO:0005768
IEA
GOA Databaseendosome
GO:0005856
IEA
GOA Databasecytoskeleton
GO:0005765
IEA
GOA Databaselysosomal membrane
GO:0005819
IEA
GOA Databasespindle
GO:0031902
IEA
GOA Databaselate endosome membrane
GO:0005774
IBA
Gene Ontologyvacuolar membrane3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005225 Small GTP-binding protein domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR006689 Small GTPase superfamily, ARF/SAR type
IPR044154 ADP-ribosylation factor-like protein 8A/8B
Mapman id Description
26.11.2.4 External stimuli response.virus.tobamovirus multiplication.small GTPase (ARL8)