Gene: CBR_g30786
General Information
Structural Information
- Species Chara braunii
- Gene Identifier CBR_g30786
- Transcript Identifier GBG62465
- Gene Type Coding gene
- Location BFEA01000029 : 1561610-1597980 : positive
Gene Family Information
- ID HOM05D000019
- #Genes/#Species 6761/20
- Phylogenetic origin
- ID ORTHO05D000002
- #Genes/#Species 15655/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid GBG62465
- uniprot A0A388JXF1
Descriptions
- Description hypothetical protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0002098 | IEA | GOA Database | tRNA wobble uridine modification | |
| GO:0002098 | IEA | InterPro | tRNA wobble uridine modification | |
| GO:0008033 | IEA | GOA Database | tRNA processing | |
| GO:0015074 | IEA | GOA Database | DNA integration |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033588 | IEA | GOA Database | elongator holoenzyme complex | |
| GO:0033588 | IEA | InterPro | elongator holoenzyme complex | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR041588 | Integrase zinc-binding domain |
| IPR041577 | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR021109 | Aspartic peptidase domain superfamily |
| IPR008728 | Elongator complex protein 4 |
| IPR036397 | Ribonuclease H superfamily |
| IPR012337 | Ribonuclease H-like superfamily |
| IPR000477 | Reverse transcriptase domain |
| IPR043502 | DNA/RNA polymerase superfamily |
| Mapman id | Description |
|---|---|
| 15.3.5.2.4 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.component ELP4 |