Gene: CANSAT78G1712

General Information

Structural Information

  • Species Cannabis sativa
  • Gene Identifier CANSAT78G1712
  • Transcript Identifier CANSAT78G1712.01
  • Gene Type Coding gene
  • Location NC_044376.1 : 23068434-23074371 : positive

Gene Family Information

  • ID HOM05D000234
  • #Genes/#Species 1784/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_030653558.1
  • pid XP_030509418.1
  • id gene-LOC115724100

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT2G32940
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA Solyc07g049500.3
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT2G32940
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing AT2G32940
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT2G32940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0035197
ISO
PLAZA Integrative OrthologysiRNA binding AT2G32940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G32940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014811 Argonaute, linker 1 domain
IPR032472 Argonaute linker 2 domain
IPR012337 Ribonuclease H-like superfamily
IPR036085 PAZ domain superfamily
IPR032474 Protein argonaute, N-terminal
IPR036397 Ribonuclease H superfamily
IPR003100 PAZ domain
IPR003165 Piwi domain
Mapman id Description
12.5.1.13 Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.siRNA-integrating factor (AGO)