Gene: AT5G63540
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT5G63540
- Transcript Identifier AT5G63540.1
- Gene Type Coding gene
- Location Chr5 : 25441033-25444373 : negative
Gene Family Information
- ID HOM05D005415
- #Genes/#Species 141/98
- Phylogenetic origin
- ID ORTHO05D006242
- #Genes/#Species 145/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT5G63540.1
- symbol RMI1
- Alias ATRMI1,BLAP75
- full_name RECQ MEDIATED INSTABILITY 1
- uniprot Q5XUX6
Descriptions
- Description recQ-mediated instability protein (DUF1767)
- Computational description RECQ MEDIATED INSTABILITY 1 (RMI1); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1767 (InterPro:IPR013894); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF1767) (TAIR:AT5G19950.3); Has 297 Blast hits to 286 proteins in 91 species: Archae - 0; Bacteria - 10; Metazoa - 136; Fungi - 20; Plants - 89; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000724 | IMP IBA | Gene Ontology | double-strand break repair via homologous recombination | 1 2 |
| GO:0000712 | IMP IBA | Gene Ontology | resolution of meiotic recombination intermediates | 2 3 |
| GO:0051321 | IEA | GOA Database | meiotic cell cycle | |
| GO:0051321 | IMP | Gene Ontology | meiotic cell cycle | 3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | Gene Ontology | nucleotide binding | |
| GO:0000166 | IEA | InterPro | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0031422 | IBA IEA | Gene Ontology | RecQ family helicase-topoisomerase III complex | 2 |
| GO:0031422 | IEA | InterPro | RecQ family helicase-topoisomerase III complex | |
| GO:0016604 | IBA | Gene Ontology | nuclear body | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR033472 | RecQ mediated genome instability protein, DUF1767 |
| IPR042470 | RecQ mediated genome instability protein, N-terminal, subdomain 2 |
| IPR039215 | RecQ-mediated genome instability protein 1 |
| IPR032199 | Recq-mediated genome instability protein 1, C-terminal OB-fold domain |
| IPR013894 | RecQ mediated genome instability protein, N-terminal |
| Mapman id | Description |
|---|---|
| 13.3.5.5.3.3 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.RTR Holliday junction dissolution complex.non-catalytic component RMI1 |