Gene: AT5G63550

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G63550
  • Transcript Identifier AT5G63550.1
  • Gene Type Coding gene
  • Location Chr5 : 25444805-25447934 : positive

Gene Family Information

  • ID HOM05D001707
  • #Genes/#Species 379/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G63550.1
  • uniprot Q9FFQ8

Descriptions

  • Description DEK domain-containing chromatin associated protein
  • Computational description DEK domain-containing chromatin associated protein; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: DEK domain-containing chromatin associated protein (TAIR:AT3G48710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006325
IEA
Gene Ontologychromatin organization
GO:0006325
IEA
InterProchromatin organization
GO:0006338
ISS
Gene Ontologychromatin remodeling
GO:0006355
ISS
Gene Ontologyregulation of transcription, DNA-templated
GO:0045892
ISS
Gene Ontologynegative regulation of transcription, DNA-templated
GO:2000779
IBA
Gene Ontologyregulation of double-strand break repair1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
Gene OntologyDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003682
ISS
Gene Ontologychromatin binding
GO:0042393
ISS, IBA
Gene Ontologyhistone binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISS, ISM, IBA
Gene Ontologynucleus1
GO:0005730
ISS
Gene Ontologynucleolus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014876 DEK, C-terminal
IPR044198 Protein DEK
Mapman id Description
12.1.4.1 Chromatin organisation.chromatin structure.structure modulation.regulatory factor (DEK)