Gene: AT1G12790

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G12790
  • Transcript Identifier AT1G12790.1
  • Gene Type Coding gene
  • Location Chr1 : 4359597-4361222 : negative

Gene Family Information

  • ID HOM05D006697
  • #Genes/#Species 120/87
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G12790.1
  • uniprot F4IDW9

Descriptions

  • Description DNA ligase-like protein
  • Computational description CONTAINS InterPro DOMAIN/s: RuvA domain 2-like (InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000712
IEA
GOA Databaseresolution of meiotic recombination intermediates
GO:0000712
IMP
Gene Ontologyresolution of meiotic recombination intermediates1
GO:0000712
IEA
InterProresolution of meiotic recombination intermediates
GO:0007131
IEA
GOA Databasereciprocal meiotic recombination
GO:0007131
IMP
Gene Ontologyreciprocal meiotic recombination2
GO:0051321
IEA
GOA Databasemeiotic cell cycle
GO:0006310
IEA
GOA DatabaseDNA recombination
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0010845
IMP
Gene Ontologypositive regulation of reciprocal meiotic recombination3
GO:0048236
IMP
Gene Ontologyplant-type sporogenesis2
GO:0009555
IMP
Gene Ontologypollen development2
GO:0007140
IMP
Gene Ontologymale meiotic nuclear division2
GO:0007059
IMP
Gene Ontologychromosome segregation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
GOA Databasenuclease activity
GO:0004519
IEA
GOA Databaseendonuclease activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005694
IEA
GOA Databasechromosome
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039172 Protein parting dancers
IPR010994 RuvA domain 2-like
IPR041663 DisA/LigA, helix-hairpin-helix motif
Mapman id Description
13.3.5.5.1.4.1 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.SHOC1-PTD heterodimer.component PTD