Gene: AT1G12780

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G12780
  • Transcript Identifier AT1G12780.1
  • Gene Type Coding gene
  • Location Chr1 : 4356124-4358120 : negative

Gene Family Information

  • ID HOM05D000776
  • #Genes/#Species 759/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G12780.1
  • symbol UGE1
  • Alias ATUGE1,A. THALIANA UDP-GLC 4-EPIMERASE 1
  • uniprot Q42605

Descriptions

  • Description UDP-D-glucose/UDP-D-galactose 4-epimerase 1
  • Computational description UDP-D-glucose/UDP-D-galactose 4-epimerase 1 (UGE1); FUNCTIONS IN: UDP-glucose 4-epimerase activity, protein dimerization activity; INVOLVED IN: response to stress, galactose biosynthetic process; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 32 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), UDP-glucose 4-epimerase (InterPro:IPR005886), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucose/UDP-D-galactose 4-epimerase 3 (TAIR:AT1G63180.1); Has 42430 Blast hits to 42420 proteins in 2995 species: Archae - 799; Bacteria - 25009; Metazoa - 650; Fungi - 500; Plants - 1081; Viruses - 38; Other Eukaryotes - 14353 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006012
IEA
Gene Ontologygalactose metabolic process
GO:0006012
IEA
InterProgalactose metabolic process
GO:0071555
IEA
GOA Databasecell wall organization
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0006364
IBA
Gene OntologyrRNA processing1
GO:0046369
IDA
Gene Ontologygalactose biosynthetic process2
GO:0045227
IEA
Gene Ontologycapsule polysaccharide biosynthetic process
GO:0033358
IEA
Gene OntologyUDP-L-arabinose biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003978
IEA
GOA DatabaseUDP-glucose 4-epimerase activity
GO:0003978
IDA, IGI
Gene OntologyUDP-glucose 4-epimerase activity3
GO:0003978
IEA
InterProUDP-glucose 4-epimerase activity
GO:0016853
IEA
GOA Databaseisomerase activity
GO:0050373
IEA
GOA DatabaseUDP-arabinose 4-epimerase activity
GO:0050373
IDA
Gene OntologyUDP-arabinose 4-epimerase activity4
GO:0003723
IBA
Gene OntologyRNA binding1
GO:0046983
IPI
Gene Ontologyprotein dimerization activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA, HDA
IBA
TAS
Gene Ontologycytosol1 2 3 5
GO:0005886
IDA
GOA Databaseplasma membrane
GO:0005886
HDA
Gene Ontologyplasma membrane6
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005886 UDP-glucose 4-epimerase
IPR036291 NAD(P)-binding domain superfamily
IPR016040 NAD(P)-binding domain
Mapman id Description
3.13.8 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucose 4-epimerase