Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr3.3336 | chr3 | - | View | |
Actinidia chinensis | Actinidia07230 | Lachesis_group13 | + | View | |
Arabidopsis lyrata | AL1G18660 | scaffold_1 | + | View | |
Avicennia marina | MSTRG.17714 | ScioBoG_19834_HRSCAF_19925 | + | View | |
Amaranthus hybridus | Ah.08g215940 | DNA polymerase epsilon catalytic subunit A (EC 2.7.7.7) (DNA polymerase 2 a) (AtPOL2a) (DNA polymerase II subunit a) (Protein ABA OVERLY SENSITIVE a) (Protein EARLY IN SHORT DAYS 7) (Protein EMBRYO DEFECTIVE 142) (Protein EMBRYO DEFECTIVE 2284) (Protein EMBRYO DEFECTIVE 529) (Protein TILTED 1) | AmaHy_arrow1_Scaffold_8 | - | View |
Aquilegia oxysepala | Aqoxy2G01337 | CHR02 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.F25EMM | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | arahy.Tifrunner.gnm1.Arahy.13 | - | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.B2Y78K | PTHR10670//PTHR10670:SF4 - DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A // SUBFAMILY NOT NAMED | arahy.Tifrunner.gnm1.Arahy.03 | - | View |
Arabidopsis thaliana | AT1G08260 | DNA polymerase epsilon catalytic subunit Similar to POL2A%2C DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal%2C partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells. TILTED 1 (TIL1)%3B FUNCTIONS IN: DNA-directed DNA polymerase activity%2C DNA binding%2C nucleotide binding%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: positive regulation of S phase of mitotic cell cycle%2C negative regulation of long-day photoperiodism%2C flowering%2C embryo development ending in seed dormancy%3B LOCATED IN: apoplast%2C epsilon DNA polymerase complex%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA polymerase%2C family B (InterPro:IPR022762)%2C DNA-directed DNA polymerase%2C family B%2C exonuclease domain (InterPro:IPR006133)%2C Domain of unknown function DUF1744 (InterPro:IPR013697)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%2C DNA-directed DNA polymerase%2C family B%2C conserved region (InterPro:IPR006134)%3B BEST Arabidopsis thaliana protein match is: DNA polymerase epsilon catalytic subunit (TAIR:AT2G27120.1)%3B Has 2011 Blast hits to 1700 proteins in 652 species: Archae - 331%3B Bacteria - 603%3B Metazoa - 305%3B Fungi - 291%3B Plants - 83%3B Viruses - 58%3B Other Eukaryotes - 340 (source: NCBI BLink). | Chr1 | + | View |
Amborella trichopoda | ATR0820G092 | AmTr_v1.0_scaffold00040 | + | View | |
Brassica carinata | BcaB07g34067 | ChrB07 | + | View | |
Brassica napus | C05p06350 | C05 | + | View | |
Brassica napus | A06p05280 | A06 | + | View | |
Brassica rapa | BraA06t23736Z | A06 | + | View | |
Beta vulgaris | EL10Ac7g15792 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | Chr7_EL10_PGA_scaffold5 | + | View |
Capsicum annuum | CAN.G644.7 | PGAv.1.6.scaffold644 | - | View | |
Cannabis sativa | CANSAT54G1671 | NC_044375.1 | + | View | |
Corylus avellana | Haze_23425 | Similar to POL2A: DNA polymerase epsilon catalytic subunit A (Arabidopsis thaliana OX%3D3702) | 6 | - | View |
Coffea canephora | Cc01_g09530 | Putative DNA polymerase epsilon catalytic subunit A | chr1 | - | View |
Citrus clementina | Ciclev10027662m.g | scaffold_8 | - | View | |
Cardamine hirsuta | CARHR008100 | DNA polymerase | Chr1 | + | View |
Carya illinoinensis | CiPaw.13G138800 | PTHR10670//PTHR10670:SF4 - DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A // SUBFAMILY NOT NAMED | Chr13 | - | View |
Citrullus lanatus | ClCG02G022050 | DNA polymerase | CG_Chr02 | + | View |
Cucumis melo | MELO3C021434.2 | DNA polymerase epsilon catalytic subunit A | chr11 | + | View |
Carica papaya | Cpa.g.sc32.131 | supercontig_32 | - | View | |
Chenopodium quinoa | AUR62009793 | POL2A: DNA polymerase epsilon catalytic subunit A | C_Quinoa_Scaffold_2493 | - | View |
Chenopodium quinoa | AUR62039240 | POL2A: DNA polymerase epsilon catalytic subunit A | C_Quinoa_Scaffold_2771 | - | View |
Capsella rubella | Carub.0001s0761 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | scaffold_1 | + | View |
Cucumis sativus L. | CsaV3_6G014890 | DNA polymerase epsilon catalytic subunit | chr6 | + | View |
Daucus carota | DCAR_012181 | hypothetical protein | DCARv2_Chr3 | + | View |
Durio zibethinus | Duzib168G1226 | NW_019168159.1 | - | View | |
Erigeron canadensis | ECA233G3796 | Conyza_canadensis_scaffold:1 | - | View | |
Eucalyptus grandis | Eucgr.B03882 | Chr02 | - | View | |
Erythranthe guttata | Migut.N02501 | scaffold_14 | + | View | |
Eutrema salsugineum | Thhalv10006524m.g | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | scaffold_5 | - | View |
Fragaria x ananassa | FAN21G1989 | PF00136//PF03104 - DNA polymerase family B (DNA_pol_B) // DNA polymerase family B, exonuclease domain (DNA_pol_B_exo1) | Fvb3-2 | + | View |
Gossypium hirsutum | Gohir.A05G082500 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | A05 | - | View |
Gossypium hirsutum | Gohir.D05G085400 | PTHR10670 - DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A | D05 | - | View |
Glycine max | Glyma.12G087000 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | Gm12 | + | View |
Gossypium raimondii | Gorai.009G087200 | Chr09 | - | View | |
Hydrangea macrophylla | Hma1.2p1_0305F.1_g119455 | Hma1.2p1_0305F.1 | + | View | |
Lupinus albus | Lalb_Chr19g0136661 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | Lalb_Chr19 | - | View |
Lotus japonicus | Lj3g0000987 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | chr3 | + | View |
Lonicera japonica | Lj2C988G5 | GWHAAZE00000002 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_6_39380 | Lsat_1_v8_lg_6 | - | View | |
Malus domestica | MD11G1160700 | DNA polymerase epsilon catalytic subunit | Chr11 | + | View |
Malus domestica | MD03G1139200 | DNA polymerase epsilon catalytic subunit | Chr03 | + | View |
Manihot esculenta | Manes.04G006100 | Chromosome04 | - | View | |
Medicago truncatula | Medtr4g054980 | DNA polymerase epsilon catalytic subunit A | chr4 | - | View |
Nelumbo nucifera | Nn2g14071 | chr2 | + | View | |
Olea europaea | Oeu031488.2 | scaffold261 | - | View | |
Petunia axillaris | Peaxi162Scf00544g00919 | DNA polymerase epsilon catalytic subunit | Peaxi162Scf00544 | - | View |
Punica granatum | PGR102G2277 | NC_045129.1 | + | View | |
Prunus persica | Prupe.6G124200 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | Pp06 | + | View |
Papaver somniferum | PSO384G0460 | NC_039368.1 | + | View | |
Populus trichocarpa | Potri.004G185700 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | Chr04 | - | View |
Phaseolus vulgaris | Phvul.011G091900 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | Chr11 | + | View |
Quercus lobata | QL01p013239 | 1 | - | View | |
Rhododendron simsii | Rhsim13G0107600 | chr13 | + | View | |
Striga asiatica | SGA_v2.0_scaffold102G29919 | scaffold102 | + | View | |
Salix brachista | Sabra04G0125000 | GWHAAZH00000004 | - | View | |
Simmondsia chinensis | Sc21g0007220 | GWHAASQ00000021 | - | View | |
Sechium edule | Sed0008797 | LG05 | + | View | |
Solanum lycopersicum | Solyc11g067110.2 | DNA polymerase epsilon catalytic subunit (AHRD V3.3 *-* A0A2G2YHJ1_CAPAN) | SL4.0ch11 | + | View |
Schrenkiella parvula | Sp1g06890 | K02324 - DNA polymerase epsilon subunit 1 (POLE1) | ch1-1 | + | View |
Selenicereus undatus | Hund20868 | Scaffold_33673 | + | View | |
Trochodendron aralioides | TAR636G3131 | group1 | + | View | |
Theobroma cacao | Thecc.09G288000 | DNA polymerase epsilon catalytic subunit | Chromosome_9 | - | View |
Tarenaya hassleriana | THA.LOC104826411 | DNA polymerase epsilon catalytic subunit A | NW_010967707.1 | + | View |
Trifolium pratense | TPR.G15595 | Tp57577_TGAC_v2_scaf_251 | - | View | |
Utricularia gibba | unitig_22.g6642 | unitig_22 | + | View | |
Vaccinium macrocarpon | vmacro03295 | Similar to POL2A: DNA polymerase epsilon catalytic subunit A (Arabidopsis thaliana OX%3D3702) | chr9_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1127G1826 | CM024076.1 | + | View | |
Vitis vinifera | GSVIVG01031365001 | chr6 | + | View |