Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc04g014370.4 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (AHRD V3.3 *** A0A2G2V069_CAPBA) SL4.0ch04 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G16680 LG-3 + View
Acer truncatum Atru.chr3.1251 chr3 + View
Actinidia chinensis Actinidia28826 Lachesis_group8 - View
Actinidia chinensis Actinidia30847 Lachesis_group25 - View
Arabidopsis lyrata AL6G21000 scaffold_6 - View
Amaranthus hybridus Ah.02g123600 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 (EC 4.2.1.134) (3-hydroxyacyl-CoA dehydratase PASTICCINO 2) (AtPAS2) (HACD) (HCD) (Protein PEPINO) (PEP) (Protein tyrosine phosphatase-like protein) AmaHy_arrow1_Scaffold_2 + View
Aquilegia oxysepala Aqoxy5G01391 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Y3UPDN K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.4PU0PP K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT5G10480 Protein-tyrosine phosphatase-like, PTPLA Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA%3B1 only in its phosphorylated form%2C preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10%2C a component of the microsomal fatty acid elongase complex%2C suggesting a role in synthesis of VLCFAs (very long chain fatty acids). PASTICCINO 2 (PAS2)%3B CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like%2C PTPLA (InterPro:IPR007482)%3B BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like%2C PTPLA (TAIR:AT5G59770.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Amborella trichopoda ATR0767G219 AmTr_v1.0_scaffold00033 + View
Brassica carinata BcaB08g37102 ChrB08 + View
Brassica carinata BcaB01g05531 ChrB01 + View
Brassica napus A03p04570 A03 - View
Brassica napus A10p27090 A10 + View
Brassica napus C03p05130 C03 - View
Brassica napus C09p66790 C09 + View
Brassica oleracea BolC3t13038H C3 - View
Brassica oleracea BolC9t59459H C9 + View
Brassica rapa BraA10t44761Z A10 + View
Beta vulgaris EL10Ac6g15209 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Chr6_EL10_PGA_scaffold0 + View
Camellia sinensis var. sinensis CSS0009628 3-hydroxyacyl-CoA dehydratase [Camellia oleifera] Chr1 + View
Capsicum annuum CAN.G1344.6 PGAv.1.6.scaffold1344 - View
Cannabis sativa CANSAT01G3290 NC_044373.1 - View
Cicer arietinum L. Ca_22603_v3 Ca_LG7_v3 - View
Corylus avellana Haze_03867 Similar to PAS2A: Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A (Oryza sativa subsp. japonica OX%3D39947) 2 - View
Coffea canephora Cc07_g14130 3-hydroxyacyl-CoA dehydratase PASTICCINO 2 chr7 + View
Carpinus fangiana Cfa006886 Cfa02 + View
Cardamine hirsuta CARHR202810 3-hydroxyacyl-CoA dehydratase Chr6 + View
Carya illinoinensis CiPaw.07G047800 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Chr07 + View
Citrullus lanatus ClCG10G007720 Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 2 CG_Chr10 - View
Corchorus olitorius COL.COLO4_27351 hypothetical protein AWUE01019531.1 - View
Carica papaya Cpa.g.sc55.29 supercontig_55 + View
Chenopodium quinoa AUR62003659 PAS2: Very-long-chain C_Quinoa_Scaffold_2370 - View
Chenopodium quinoa AUR62017968 PAS2: Very-long-chain C_Quinoa_Scaffold_3086 - View
Capsella rubella Carub.0006s0896 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase scaffold_6 - View
Cucumis sativus L. CsaV3_3G006860 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase chr3 - View
Daucus carota DCAR_014186 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv36926 GWHABJS00000021 + View
Davidia involucrata Dinv13605 GWHABJS00000014 + View
Durio zibethinus Duzib264G0362 NW_019167960.1 - View
Durio zibethinus Duzib187G1704 NW_019167860.1 - View
Erigeron canadensis ECA246G1176 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA238G4457 Conyza_canadensis_scaffold:6 + View
Eutrema salsugineum Thhalv10014620m.g K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) scaffold_2 - View
Fragaria x ananassa FAN23G0465 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Fvb1-3 + View
Fragaria x ananassa FAN28G1749 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Fvb1-1 - View
Fragaria x ananassa FAN26G2403 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Fvb1-2 + View
Fragaria x ananassa FAN19G0871 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Fvb1-4 + View
Fragaria vesca FvH4_1g19690 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Fvb1 + View
Gossypium hirsutum Gohir.D11G216900 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase D11 + View
Gossypium hirsutum Gohir.A11G206700 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase A11 - View
Glycine max Glyma.08G279700 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Gm08 + View
Glycine max Glyma.01G023400 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Gm01 + View
Glycine max Glyma.18G146900 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Gm18 - View
Gossypium raimondii Gorai.007G233000 Chr07 + View
Helianthus annuus HanXRQChr14g0442921 Probable protein-tyrosine phosphatase-like, PTPLA HanXRQChr14 - View
Lupinus albus Lalb_Chr05g0216341 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Lalb_Chr05 - View
Lupinus albus Lalb_Chr16g0381641 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Lalb_Chr16 + View
Lotus japonicus Lj4g0019109 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase chr4 + View
Lonicera japonica Lju188A2T35 GWHAAZE00000040 - View
Lactuca sativa Lsat_1_v5_gn_2_70580 Lsat_1_v8_lg_2 + View
Lactuca sativa Lsat_1_v5_gn_3_62861 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Lsat_1_v8_lg_3 - View
Magnolia biondii MBI16_g27585_MAGBIO AED:0.30 Chr16 + View
Malus domestica MD01G1038800 Protein-tyrosine phosphatase-like Chr01 - View
Malus domestica MD15G1312800 Protein-tyrosine phosphatase-like Chr15 + View
Manihot esculenta Manes.13G099500 Chromosome13 - View
Medicago truncatula Medtr8g471160 3-hydroxyacyl-CoA dehydratase chr8 + View
Nelumbo nucifera Nn5g29888 chr5 + View
Nelumbo nucifera Nn1g05564 chr1 - View
Nicotiana tabacum Nitab4.5_0001468g0120 Protein-tyrosine phosphatase-like, PTPLA Nitab4.5_0001468 - View
Nicotiana tabacum Nitab4.5_0004153g0110 Protein-tyrosine phosphatase-like, PTPLA Nitab4.5_0004153 - View
Nicotiana tabacum Nitab4.5_0000902g0360 Protein-tyrosine phosphatase-like, PTPLA Nitab4.5_0000902 - View
Prunus persica Prupe.6G201300 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Pp06 - View
Papaver somniferum PSO541G1644 NC_039363.1 - View
Populus trichocarpa Potri.007G010900 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase Chr07 + View
Phaseolus vulgaris Phvul.002G147400 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Chr02 + View
Phaseolus vulgaris Phvul.003G289100 K10703 - very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (PHS1, PAS2) Chr03 + View
Quercus lobata QL06p035732 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0111251 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0016400 chr08 - View
Salix brachista Sabra07G0008400 GWHAAZH00000007 + View
Simmondsia chinensis Sc03g0000310 GWHAASQ00000003 - View
Sechium edule Sed0019313 LG13 + View
Schrenkiella parvula Sp6g32950 4.2.1.134 - Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase ch6-6 + View
Solanum pennellii Sopen04g006490 Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA, 1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids). | PASTICCINO 2 (PAS2) | CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA | BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA ., Protein-tyrosine phosphatase-like, PTPLA Spenn-ch04 - View
Solanum pennellii Sopen11g005390 Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA, 1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids). | PASTICCINO 2 (PAS2) | CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase-like, PTPLA | BEST Arabidopsis thaliana protein match is: Protein-tyrosine phosphatase-like, PTPLA ., Protein-tyrosine phosphatase-like, PTPLA Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400016135 Tyrosine phosphatase ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400023576 PASTICCINO 2 ST4.03ch04 - View
Selenicereus undatus Hund16535 Scaffold_33677 + View
Trochodendron aralioides TAR381G0377 group11 + View
Trochodendron aralioides TAR625G1314 group4 + View
Theobroma cacao Thecc.01G091200 Tyrosine phosphatase-like protein PASTICCINO 2A Chromosome_1 + View
Tarenaya hassleriana THA.LOC104819292 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2-like isoform X1 NW_010966177.1 + View
Tarenaya hassleriana THA.LOC104798725 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 NW_010960188.1 + View
Trifolium pratense TPR.G14596 Tp57577_TGAC_v2_LG7 + View
Tripterygium wilfordii TWI74G1117 NC_052234.1 + View
Tripterygium wilfordii TWI53G1737 NC_052244.1 - View
Vaccinium macrocarpon vmacro18559 Similar to PAS2: Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G2520 CM024069.1 + View
Vigna mungo VMungo1215G0627 CM024074.1 + View
Vitis vinifera GSVIVG01005931001 chrUn + View