Gene: Ah.02g123600
General Information
Structural Information
- Species Amaranthus hybridus
- Gene Identifier Ah.02g123600
- Transcript Identifier Ah.02g123600-v1.1.a1
- Gene Type Coding gene
- Location AmaHy_arrow1_Scaffold_2 : 24242041-24245075 : positive
Gene Family Information
- ID HOM05D004350
- #Genes/#Species 164/96
- Phylogenetic origin
- ID ORTHO05D005260
- #Genes/#Species 161/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Ah.02g123600-v1.1.a1
Descriptions
- Description Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 (EC 4.2.1.134) (3-hydroxyacyl-CoA dehydratase PASTICCINO 2) (AtPAS2) (HACD) (HCD) (Protein PEPINO) (PEP) (Protein tyrosine phosphatase-like protein)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051302 | ISO | PLAZA Integrative Orthology | regulation of cell division | AT5G10480 |
| GO:0048640 | ISO | PLAZA Integrative Orthology | negative regulation of developmental growth | AT5G10480 |
| GO:0030154 | ISO | PLAZA Integrative Orthology | cell differentiation | AT5G10480 |
| GO:0042761 | ISO | PLAZA Integrative Orthology | very long-chain fatty acid biosynthetic process | AT5G10480 |
| GO:0050732 | ISO | PLAZA Integrative Orthology | negative regulation of peptidyl-tyrosine phosphorylation | AT5G10480 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G10480 |
| GO:0080023 | ISO | PLAZA Integrative Orthology | 3R-hydroxyacyl-CoA dehydratase activity | AT5G10480 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G10480 |
| GO:0016021 | ISO | PLAZA Integrative Orthology | integral component of membrane | AT5G10480 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G10480 |
| GO:0009923 | ISO | PLAZA Integrative Orthology | fatty acid elongase complex | AT5G10480 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007482 | Protein-tyrosine phosphatase-like, PTPLA |
| Mapman id | Description |
|---|---|
| 5.1.6.1.2 | Lipid metabolism.fatty acid biosynthesis.endoplasmic reticulum-localized fatty acid elongase (FAE) system.fatty acid elongation complex.3-hydroxyacyl-CoA dehydratase (HCD) |