Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G17280 LG-2 - View
Acer truncatum Atru.chr7.2154 chr7 - View
Actinidia chinensis Actinidia13311 Lachesis_group18 + View
Actinidia chinensis Actinidia31224 Lachesis_group14 - View
Arabidopsis lyrata AL6G22170 scaffold_6 + View
Arabidopsis lyrata AL7G19020 scaffold_7 - View
Amaranthus hybridus Ah.16g105290 La protein 1 (AtLa1) AmaHy_arrow1_Scaffold_16 + View
Amaranthus hybridus Ah.10g035220 Coiled-coil domain-containing protein 25 AmaHy_arrow1_Scaffold_10 - View
Aquilegia oxysepala Aqoxy7G01616 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KUD1W7 K11090 - lupus La protein (LA, SSB) arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I11X1M K11090 - lupus La protein (LA, SSB) arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT5G11500 coiled-coil protein unknown protein%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF814 (InterPro:IPR008532)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT4G32720 La protein 1 Encodes AtLa1%2C a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis. La protein 1 (La1)%3B FUNCTIONS IN: RNA binding%3B INVOLVED IN: embryo development%2C ribosome biogenesis%3B LOCATED IN: nucleoplasm%2C cell wall%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C RNA-binding protein Lupus La (InterPro:IPR006630)%2C Lupus La protein (InterPro:IPR002344)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%2C RNA-binding motif (InterPro:IPR014886)%3B BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT1G79880.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Amborella trichopoda ATR0315G044 AmTr_v1.0_scaffold00109 - View
Brassica carinata BcaC09g52067 ChrC09 + View
Brassica carinata BcaC04g19219 ChrC04 - View
Brassica carinata BcaB08g37053 ChrB08 - View
Brassica napus A01p05590 A01 - View
Brassica napus C09p65340 C09 - View
Brassica napus C03p87060 C03 - View
Brassica oleracea BolC3t21003H C3 - View
Brassica oleracea BolC1t00615H C1 - View
Brassica oleracea BolC9t59360H C9 - View
Brassica rapa BraA08t33746Z A08 - View
Beta vulgaris EL10Ac2g04067 PTHR13049//PTHR13049:SF3 - DUF814-RELATED // SUBFAMILY NOT NAMED Chr2_EL10_PGA_scaffold6 + View
Camellia sinensis var. sinensis CSS0018831 PREDICTED: la protein 1 [Vitis vinifera] Chr14 + View
Capsicum annuum CAN.G21.29 PGAv.1.6.scaffold21 + View
Cannabis sativa CANSAT25G1999 NC_044370.1 - View
Cicer arietinum L. Ca_15617_v3 Ca_LG5_v3 - View
Corylus avellana Haze_21860 Protein of unknown function 3 + View
Coffea canephora Cc08_g09010 Coiled-coil domain-containing protein 25 chr8 + View
Citrus clementina Ciclev10009455m.g scaffold_1 + View
Carpinus fangiana Cfa013347 Cfa05 + View
Cardamine hirsuta CARHR201720 Coiled-coil domain-containing protein, putative Chr6 - View
Cardamine hirsuta CARHR240720 RNA-binding La domain protein Chr7 + View
Carya illinoinensis CiPaw.08G023800 KOG3272 - Predicted coiled-coil protein Chr08 + View
Carya illinoinensis CiPaw.07G206800 PTHR13049//PTHR13049:SF3 - DUF814-RELATED // SUBFAMILY NOT NAMED Chr07 - View
Citrullus lanatus ClCG11G014050 Coiled-coil domain-containing protein, putative CG_Chr11 + View
Cucumis melo MELO3C003579.2 Coiled-coil protein chr04 - View
Corchorus olitorius COL.COLO4_18692 Lupus La protein AWUE01016488.1 - View
Carica papaya Cpa.g.sc78.77 supercontig_78 - View
Chenopodium quinoa AUR62009326 LA1: La protein 1 C_Quinoa_Scaffold_3674 - View
Chenopodium quinoa AUR62023013 LA1: La protein 1 C_Quinoa_Scaffold_1189 - View
Capsella rubella Carub.0007s0776 K11090 - lupus La protein (LA, SSB) scaffold_7 - View
Capsella rubella Carub.0006s0996 PTHR13049 - DUF814-RELATED scaffold_6 + View
Cucumis sativus L. CsaV3_3G047450 coiled-coil domain-containing protein 25 chr3 + View
Daucus carota DCAR_000746 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_004495 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_007706 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv30257 GWHABJS00000003 - View
Davidia involucrata Dinv14229 GWHABJS00000017 - View
Durio zibethinus Duzib187G1109 NW_019167860.1 - View
Durio zibethinus Duzib150G0439 NW_019167882.1 + View
Durio zibethinus Duzib168G0571 NW_019168159.1 + View
Erigeron canadensis ECA246G2183 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.C01584 Chr03 - View
Erythranthe guttata Migut.A00234 scaffold_1 - View
Eutrema salsugineum Thhalv10025209m.g K11090 - lupus La protein (LA, SSB) scaffold_1 - View
Fragaria x ananassa FAN15G1328 K11090 - lupus La protein (LA, SSB) Fvb2-4 - View
Fragaria x ananassa FAN27G3372 K11090 - lupus La protein (LA, SSB) Fvb2-1 - View
Fragaria vesca FvH4_2g36050 K11090 - lupus La protein (LA, SSB) Fvb2 - View
Gossypium hirsutum Gohir.D07G027300 PF00076//PF08777 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA binding motif (RRM_3) D07 - View
Gossypium hirsutum Gohir.A07G023700 PTHR22792//PTHR22792:SF64 - LUPUS LA PROTEIN-RELATED // LA PROTEIN 1-RELATED A07 - View
Gossypium hirsutum Gohir.D05G049500 PTHR13049//PTHR13049:SF3 - DUF814-RELATED // SUBFAMILY NOT NAMED D05 + View
Gossypium hirsutum Gohir.A05G048100 K11090 - lupus La protein (LA, SSB) A05 - View
Glycine max Glyma.06G082100 PTHR13049 - DUF814-RELATED Gm06 + View
Glycine max Glyma.04G080400 PTHR13049 - DUF814-RELATED Gm04 + View
Glycine max Glyma.14G143700 PTHR22792//PTHR22792:SF64 - LUPUS LA PROTEIN-RELATED // LA PROTEIN 1-RELATED Gm14 - View
Gossypium raimondii Gorai.009G050800 Chr09 + View
Gossypium raimondii Gorai.001G028400 Chr01 - View
Hydrangea macrophylla Hma1.2p1_0140F.1_g063490 Hma1.2p1_0140F.1 - View
Lupinus albus Lalb_Chr23g0269461 KOG3272 - Predicted coiled-coil protein Lalb_Chr23 + View
Lupinus albus Lalb_Chr08g0243251 KOG3272 - Predicted coiled-coil protein Lalb_Chr08 - View
Lotus japonicus Lj1g0005918 K11090 - lupus La protein (LA, SSB) chr1 - View
Lonicera japonica Lj8C597T6 GWHAAZE00000008 - View
Lonicera japonica Lj7C706T10 GWHAAZE00000007 - View
Lactuca sativa Lsat_1_v5_gn_5_33160 K11090 - lupus La protein (LA, SSB) Lsat_1_v8_lg_5 - View
Magnolia biondii MBI01_g07170_MAGBIO AED:0.24 Chr01 + View
Magnolia biondii MBI04_g19163_MAGBIO AED:0.21 Chr04 + View
Malus domestica MD08G1117800 La protein 1 Chr08 - View
Malus domestica MD15G1097100 La protein 1 Chr15 - View
Manihot esculenta Manes.03G063200 Chromosome03 - View
Manihot esculenta Manes.16G065900 Chromosome16 + View
Medicago truncatula Medtr1g026890 RNA recognition motif protein chr1 - View
Nelumbo nucifera Nn2g11707 chr2 - View
Nicotiana tabacum Nitab4.5_0000052g0180 Domain of unknown function DUF814 Nitab4.5_0000052 + View
Olea europaea Oeu012185.1 scaffold1471 + View
Petunia axillaris Peaxi162Scf00523g00112 RNA recognition motif (RRM)-containing protein Peaxi162Scf00523 - View
Punica granatum PGR044G1166 NC_045134.1 - View
Punica granatum PGR031G0301 NC_045127.1 - View
Prunus persica Prupe.1G452100 K11090 - lupus La protein (LA, SSB) Pp01 - View
Papaver somniferum PSO782G2488 NC_039365.1 + View
Populus trichocarpa Potri.006G241800 K11090 - lupus La protein (LA, SSB) Chr06 - View
Populus trichocarpa Potri.018G037800 PTHR13049//PTHR13049:SF3 - DUF814-RELATED // SUBFAMILY NOT NAMED Chr18 + View
Phaseolus vulgaris Phvul.009G106500 PTHR13049 - DUF814-RELATED Chr09 + View
Quercus lobata QL12p026578 12 + View
Rosa chinensis RcHm_v2.0_Chr6g0305791 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim02G0181700 chr02 - View
Salvia bowleyana SalBow4G1753 GWHASIU00000008 - View
Salix brachista Sabra18G0038400 GWHAAZH00000018 + View
Salix brachista Sabra06G0189200 GWHAAZH00000006 - View
Simmondsia chinensis Sc09g0009110 GWHAASQ00000009 + View
Sechium edule Sed0015028 LG05 - View
Sechium edule Sed0010239 LG01 - View
Schrenkiella parvula Sp7g30490 K11090 - lupus La protein (LA, SSB) ch7-5 + View
Schrenkiella parvula Sp6g32100 KOG3272 - Predicted coiled-coil protein ch6-6 - View
Solanum pennellii Sopen08g022150 unknown protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF814 . Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400010834 Coiled-coil domain-containing protein ST4.03ch08 + View
Selenicereus undatus Hund03438 Scaffold_19641 - View
Selenicereus undatus Hund19544 Scaffold_33673 - View
Trochodendron aralioides TAR383G0375 group10 + View
Trochodendron aralioides TAR626G0413 group3 - View
Theobroma cacao Thecc.09G040200 Uncharacterized protein Chromosome_9 + View
Tarenaya hassleriana THA.LOC104799203 coiled-coil domain-containing protein 25 NW_010968505.1 - View
Tarenaya hassleriana THA.LOC104803768 la protein 1 NW_010971389.1 - View
Trifolium pratense TPR.G1376 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI32G0570 NC_052254.1 - View
Tripterygium wilfordii TWI63G1366 NC_052240.1 + View
Vaccinium macrocarpon vmacro11077 Similar to LA1: La protein 1 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G0461 CM024072.1 - View
Vitis vinifera GSVIVG01035666001 chr4 - View