Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Solyc10g006400.3 Tryptophan synthase beta chain (AHRD V3.3 *** B2J8R2_NOSP7) SL4.0ch10 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G10330 LG-5 - View
Acer truncatum Atru.chr10.2160 chr10 + View
Acer truncatum Atru.chr2.3258 chr2 - View
Actinidia chinensis Actinidia05112 Lachesis_group19 + View
Actinidia chinensis Actinidia09917 Lachesis_group5 + View
Actinidia chinensis Actinidia35327 Lachesis_group2 - View
Actinidia chinensis Actinidia26941 Lachesis_group0 - View
Arabidopsis lyrata AL7G25730 scaffold_7 - View
Avicennia marina MSTRG.14427 ScioBoG_18782_HRSCAF_18867 - View
Avicennia marina MSTRG.6904 ScioBoG_102840_HRSCAF_103099 - View
Amaranthus hybridus Ah.04g165650 Tryptophan synthase beta chain 2, chloroplastic (EC 4.2.1.20) AmaHy_arrow1_Scaffold_4 - View
Aquilegia oxysepala Aqoxy1G03310 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.04U8N5 K01696 - tryptophan synthase beta chain (trpB) arahy.Tifrunner.gnm1.Arahy.11 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.EE2GV2 K01696 - tryptophan synthase beta chain (trpB) arahy.Tifrunner.gnm1.Arahy.01 - View
Arabidopsis thaliana AT4G27070 tryptophan synthase beta-subunit 2 Tryptophan synthase beta. Expressed at low levels in all tissues. tryptophan synthase beta-subunit 2 (TSB2)%3B CONTAINS InterPro DOMAIN/s: Tryptophan synthase%2C beta chain (InterPro:IPR006654)%2C Pyridoxal phosphate-dependent enzyme%2C beta subunit (InterPro:IPR001926)%2C Tryptophan synthase%2C beta chain%2C conserved site (InterPro:IPR006653)%3B BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 1 (TAIR:AT5G54810.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT5G54810 tryptophan synthase beta-subunit 1 A.thaliana tryptophan synthase beta subunit (trpB) tryptophan synthase beta-subunit 1 (TSB1)%3B FUNCTIONS IN: tryptophan synthase activity%3B INVOLVED IN: response to oxidative stress%2C tryptophan biosynthetic process%2C response to salt stress%2C indoleacetic acid biosynthetic process%3B LOCATED IN: chloroplast stroma%2C chloroplast%3B EXPRESSED IN: guard cell%2C root%3B CONTAINS InterPro DOMAIN/s: Tryptophan synthase%2C beta chain (InterPro:IPR006654)%2C Tryptophan synthase%2C beta chain%2C conserved site (InterPro:IPR006653)%2C Pyridoxal phosphate-dependent enzyme%2C beta subunit (InterPro:IPR001926)%3B BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 (TAIR:AT4G27070.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB05g22161 ChrB05 - View
Brassica carinata BcaC04g20299 ChrC04 + View
Brassica napus A10p12100 A10 - View
Brassica napus A01p18220 A01 + View
Brassica napus C02p16630 C02 + View
Brassica napus C09p45310 C09 - View
Brassica oleracea BolC9t57401H C9 - View
Brassica oleracea BolC2t07769H C2 + View
Brassica rapa BraA01t01777Z A01 + View
Brassica rapa BraA10t43309Z A10 - View
Beta vulgaris EL10Ac8g20005 PTHR10314:SF123 - TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN Chr8_EL10_PGA_scaffold4 + View
Beta vulgaris EL10Ac4g07905 PTHR10314:SF98 - TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0034968 PREDICTED: tryptophan synthase beta chain 1 [Vitis vinifera] Chr8 + View
Camellia sinensis var. sinensis CSS0034182 PREDICTED: tryptophan synthase beta chain 1 [Cucumis melo] Chr7 + View
Capsicum annuum CAN.G337.102 PGAv.1.6.scaffold337 - View
Capsicum annuum CAN.G1781.11 PGAv.1.6.scaffold1781 + View
Cicer arietinum L. Ca_14708_v3 Ca_LG5_v3 - View
Corylus avellana Haze_06756 Similar to TSB: Tryptophan synthase beta chain 2, chloroplastic (Camptotheca acuminata OX%3D16922) 2 + View
Corylus avellana Haze_09641 Similar to TSB: Tryptophan synthase beta chain 2, chloroplastic (Camptotheca acuminata OX%3D16922) 4 - View
Coffea canephora Cc02_g11550 Tryptophan synthase beta chain 2, chloroplastic chr2 - View
Coffea canephora Cc05_g13460 Tryptophan synthase beta chain 2, chloroplastic chr5 - View
Citrus clementina Ciclev10008204m.g scaffold_1 - View
Ceratophyllum demersum CDE05G0666 3 - View
Ceratophyllum demersum CDE05G1999 3 + View
Carpinus fangiana Cfa020393 Cfa08 + View
Carpinus fangiana Cfa014418 Cfa06 + View
Cardamine hirsuta CARHR011890 Tryptophan synthase beta chain Chr1 + View
Cardamine hirsuta CARHR234720 Tryptophan synthase beta chain 1 Chr7 + View
Cardamine hirsuta CARHR268150 Tryptophan synthase beta chain 1 Chr8 - View
Carya illinoinensis CiPaw.12G127800 PTHR10314:SF98 - TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED Chr12 - View
Carya illinoinensis CiPaw.11G186400 PTHR10314:SF98 - TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED Chr11 - View
Carya illinoinensis CiPaw.09G088500 PTHR10314:SF123 - TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN Chr09 + View
Citrullus lanatus ClCG05G014530 Tryptophan synthase beta chain 1 CG_Chr05 + View
Cucumis melo MELO3C018082.2 Tryptophan synthase chr04 - View
Carica papaya Cpa.g.sc97.46 supercontig_97 - View
Chenopodium quinoa AUR62012662 TSB: Tryptophan synthase beta chain 2, chloroplastic C_Quinoa_Scaffold_2715 + View
Chenopodium quinoa AUR62015700 TSB: Tryptophan synthase beta chain 2, chloroplastic C_Quinoa_Scaffold_1529 - View
Chenopodium quinoa AUR62020505 TSB: Tryptophan synthase beta chain 2, chloroplastic C_Quinoa_Scaffold_1373 + View
Capsella rubella Carub.0007s1378 K01696 - tryptophan synthase beta chain (trpB) scaffold_7 - View
Capsella rubella Carub.0008s1508 K01696 - tryptophan synthase beta chain (trpB) scaffold_8 - View
Cucumis sativus L. CsaV3_1G010970 Tryptophan synthase beta chain chr1 - View
Daucus carota DCAR_010034 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv22288 GWHABJS00000001 - View
Davidia involucrata Dinv20027 GWHABJS00000020 + View
Durio zibethinus Duzib170G0422 NW_019167871.1 + View
Durio zibethinus Duzib192G0600 NW_019168037.1 - View
Durio zibethinus Duzib213G0207 NW_019167993.1 + View
Durio zibethinus Duzib268G0665 NW_019168270.1 + View
Erigeron canadensis ECA240G2334 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.D01297 Chr04 + View
Eucalyptus grandis Eucgr.F03443 Chr06 + View
Erythranthe guttata Migut.H01846 scaffold_8 + View
Erythranthe guttata Migut.M01294 scaffold_13 + View
Erythranthe guttata Migut.M01790 scaffold_13 + View
Eutrema salsugineum Thhalv10025097m.g K01696 - tryptophan synthase beta chain (trpB) scaffold_1 - View
Fragaria x ananassa FAN16G3085 K01696 - tryptophan synthase beta chain (trpB) Fvb3-3 - View
Fragaria x ananassa FAN21G2723 K01696 - tryptophan synthase beta chain (trpB) Fvb3-2 - View
Fragaria x ananassa FAN25G3785 K01696 - tryptophan synthase beta chain (trpB) Fvb3-1 + View
Fragaria x ananassa FAN11G2880 K01696 - tryptophan synthase beta chain (trpB) Fvb3-4 + View
Fragaria vesca FvH4_3g22100 K01696 - tryptophan synthase beta chain (trpB) Fvb3 - View
Gossypium hirsutum Gohir.D13G144200 K01696 - tryptophan synthase beta chain (trpB) D13 + View
Gossypium hirsutum Gohir.A13G139400 K01696 - tryptophan synthase beta chain (trpB) A13 + View
Gossypium hirsutum Gohir.A04G020100 KOG1395 - Tryptophan synthase beta chain A04 + View
Gossypium hirsutum Gohir.D05G366350 KOG1395 - Tryptophan synthase beta chain D05 - View
Gossypium raimondii Gorai.009G425500 Chr09 + View
Gossypium raimondii Gorai.013G161300 Chr13 + View
Gossypium raimondii Gorai.010G178000 Chr10 + View
Hydrangea macrophylla Hma1.2p1_0938F.1_g239170 Hma1.2p1_0938F.1 - View
Lotus japonicus Lj6g0013122 K01696 - tryptophan synthase beta chain (trpB) chr6 - View
Lonicera japonica Lj8C167T13 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_7_109340 K01696 - tryptophan synthase beta chain (trpB) Lsat_1_v8_lg_7 - View
Lactuca sativa Lsat_1_v5_gn_7_17281 PTHR10314:SF123 - TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN Lsat_1_v8_lg_7 + View
Magnolia biondii MBI02_g15274_MAGBIO AED:0.32 Chr02 - View
Malus domestica MD03G1208800 tryptophan synthase beta-subunit 2 Chr03 + View
Malus domestica MD11G1223500 tryptophan synthase beta-subunit 2 Chr11 + View
Manihot esculenta Manes.16G010900 Chromosome16 - View
Manihot esculenta Manes.15G074600 Chromosome15 + View
Manihot esculenta Manes.03G127600 Chromosome03 - View
Nelumbo nucifera Nn1g03597 chr1 + View
Nicotiana tabacum Nitab4.5_0002342g0010 Tryptophan synthase beta chain/beta chain-like, Tryptophan synthase, beta chain, Tryptophan synthase, beta chain, conserved site, Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily Nitab4.5_0002342 + View
Nicotiana tabacum Nitab4.5_0000397g0290 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase, Tryptophan synthase, beta chain, Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily, Tryptophan synthase, beta chain, conserved site Nitab4.5_0000397 - View
Nicotiana tabacum Nitab4.5_0002229g0210 Tryptophan synthase, beta chain, conserved site, Tryptophan synthase, beta chain, Tryptophan synthase beta chain/beta chain-like, Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily Nitab4.5_0002229 - View
Olea europaea Oeu005456.1 chr10 + View
Olea europaea Oeu021400.1 scaffold1932 + View
Oryza sativa ssp. japonica Os08g0135900 Similar to Tryptophan synthase beta chain 1 (EC 4.2.1.20) (Orange pericarp 1) (Fragment). Similar to Tryptophan synthase beta-subunit. chr08 + View
Petunia axillaris Peaxi162Scf00450g00863 Tryptophan synthase beta chain 1 Peaxi162Scf00450 + View
Punica granatum PGR083G0335 NC_045133.1 + View
Punica granatum PGR031G0667 NC_045127.1 + View
Prunus persica Prupe.4G207900 K01696 - tryptophan synthase beta chain (trpB) Pp04 - View
Papaver somniferum PSO832G0857 NC_039367.1 - View
Populus trichocarpa Potri.011G136000 K01696 - tryptophan synthase beta chain (trpB) Chr11 - View
Populus trichocarpa Potri.001G420300 K01696 - tryptophan synthase beta chain (trpB) Chr01 - View
Quercus lobata QL08p012211 8 + View
Quercus lobata QL05p074622 5 - View
Rosa chinensis RcHm_v2.0_Chr5g0037911 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim04G0000400 chr04 - View
Rhododendron simsii Rhsim06G0214300 chr06 - View
Striga asiatica SGA_v2.0_scaffold9G05053 scaffold9 - View
Salvia bowleyana SalBow8G3259 GWHASIU00000004 - View
Salix brachista Sabra11G0122200 GWHAAZH00000011 - View
Salix brachista Sabra16G0285300 GWHAAZH00000016 - View
Sechium edule Sed0022292 LG07 - View
Sechium edule Sed0016464 LG04 - View
Schrenkiella parvula Sp7g25040 PTHR10314:SF98 - TRYPTOPHAN SYNTHASE BETA CHAIN 1, CHLOROPLASTIC-RELATED ch7-4 + View
Schrenkiella parvula Sp1g10210 PTHR10314:SF123 - TRYPTOPHAN SYNTHASE BETA CHAIN-LIKE PROTEIN ch1-1 + View
Solanum pennellii Sopen10g002350 A.thaliana tryptophan synthase beta subunit (trpB) | tryptophan synthase beta-subunit 1 (TSB1) | FUNCTIONS IN: tryptophan synthase activity | INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process | LOCATED IN: chloroplast stroma, chloroplast | EXPRESSED IN: guard cell, root | CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain , Tryptophan synthase, beta chain, conserved site , Pyridoxal phosphate-dependent enzyme, beta subunit | BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 Spenn-ch10 + View
Solanum pennellii Sopen07g032430 A.thaliana tryptophan synthase beta subunit (trpB) | tryptophan synthase beta-subunit 1 (TSB1) | FUNCTIONS IN: tryptophan synthase activity | INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process | LOCATED IN: chloroplast stroma, chloroplast | EXPRESSED IN: guard cell, root | CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain , Tryptophan synthase, beta chain, conserved site , Pyridoxal phosphate-dependent enzyme, beta subunit | BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2 Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400001048 Tryptophan synthase beta subunit ST4.03ch07 - View
Solanum tuberosum PGSC0003DMG401014396 Tryptophan synthase beta subunit ST4.03ch10 + View
Selenicereus undatus Hund23496 Scaffold_3410 - View
Selenicereus undatus Hund23282 Scaffold_33680 + View
Trochodendron aralioides TAR627G1020 group6 + View
Trochodendron aralioides TAR629G3294 group0 - View
Trochodendron aralioides TAR624G0042 group9 - View
Theobroma cacao Thecc.06G216000 Pyridoxal-5'-phosphate-dependent enzyme family protein Chromosome_6 + View
Theobroma cacao Thecc.07G044700 Tryptophan synthase beta-subunit 2 Chromosome_7 + View
Tarenaya hassleriana THA.LOC104817648 tryptophan synthase beta chain 2%2C chloroplastic NW_010966021.1 + View
Tarenaya hassleriana THA.LOC104813419 tryptophan synthase beta chain 1%2C chloroplastic NW_010965373.1 - View
Tripterygium wilfordii TWI38G0248 NC_052252.1 + View
Tripterygium wilfordii TWI38G0455 NC_052252.1 + View
Vaccinium macrocarpon vmacro09738 Similar to TSB: Tryptophan synthase beta chain 2, chloroplastic (Camptotheca acuminata OX%3D16922) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro11744 Similar to TSB: Tryptophan synthase beta chain 2, chloroplastic (Camptotheca acuminata OX%3D16922) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro03699 Similar to TSB: Tryptophan synthase beta chain 2, chloroplastic (Camptotheca acuminata OX%3D16922) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01001997001 chr19 - View
Zea mays Zm00001eb416990 Zm00001e040313 Tryptophan synthase Tryptophan synthase beta chain 2%2C chloroplastic 10 - View