Gene: AT4G27070

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G27070
  • Transcript Identifier AT4G27070.1
  • Gene Type Coding gene
  • Location Chr4 : 13586564-13588619 : positive

Gene Family Information

  • ID HOM05D001748
  • #Genes/#Species 370/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G27070.1
  • symbol TSB2
  • uniprot P25269

Descriptions

  • Description tryptophan synthase beta-subunit 2
  • Computational description tryptophan synthase beta-subunit 2 (TSB2); CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain (InterPro:IPR006654), Pyridoxal phosphate-dependent enzyme, beta subunit (InterPro:IPR001926), Tryptophan synthase, beta chain, conserved site (InterPro:IPR006653); BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 1 (TAIR:AT5G54810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000162
IBA
TAS, IEA
Gene Ontologytryptophan biosynthetic process1 2
GO:0000162
IEA
InterProtryptophan biosynthetic process
GO:0006568
IEA
GOA Databasetryptophan metabolic process
GO:0006568
IEA
InterProtryptophan metabolic process
GO:0009073
IEA
GOA Databasearomatic amino acid family biosynthetic process
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004834
IEA
GOA Databasetryptophan synthase activity
GO:0004834
IMP
ISS
Gene Ontologytryptophan synthase activity1
GO:0004834
IEA
InterProtryptophan synthase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
IEA
GOA Databaseplastid
GO:0009941
IDA
GOA Databasechloroplast envelope
GO:0009941
HDA
Gene Ontologychloroplast envelope4
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
IBA
Gene Ontologychloroplast stroma2 4
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM
Gene Ontologychloroplast1
GO:0005737
IBA
Gene Ontologycytoplasm2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR006654 Tryptophan synthase, beta chain
IPR023026 Tryptophan synthase beta chain/beta chain-like
IPR001926 Pyridoxal-phosphate dependent enzyme
Mapman id Description
4.1.5.3.5.2 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit beta