Gene: BraA10t43309Z

General Information

Structural Information

  • Species Brassica rapa
  • Gene Identifier BraA10t43309Z
  • Transcript Identifier BraA10t43309Z
  • Gene Type Coding gene
  • Location A10 : 7512580-7514417 : negative

Gene Family Information

  • ID HOM05D001748
  • #Genes/#Species 370/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • uniprot A0A397XN47

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000162
IEA
GOA Databasetryptophan biosynthetic process
GO:0000162
IEA
InterProtryptophan biosynthetic process
GO:0009684
ISO
PLAZA Integrative Orthologyindoleacetic acid biosynthetic process AT5G54810
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G54810
GO:0006568
IEA
GOA Databasetryptophan metabolic process
GO:0006568
IEA
InterProtryptophan metabolic process
GO:0009073
IEA
GOA Databasearomatic amino acid family biosynthetic process
GO:0008652
IEA
GOA Databasecellular amino acid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G27070
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT5G54810
GO:0004834
IEA
GOA Databasetryptophan synthase activity
GO:0004834
IEA
InterProtryptophan synthase activity
GO:0016829
IEA
GOA Databaselyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G54810
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G27070
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G27070
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G27070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001926 Pyridoxal-phosphate dependent enzyme
IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR006654 Tryptophan synthase, beta chain
IPR023026 Tryptophan synthase beta chain/beta chain-like
Mapman id Description
4.1.5.3.5.2 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit beta