Gene: Sopen07g032430

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g032430
  • Transcript Identifier Sopen07g032430.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 77624172-77627531 : negative

Gene Family Information

  • ID HOM05D001748
  • #Genes/#Species 370/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g032430.1

Descriptions

  • Description A.thaliana tryptophan synthase beta subunit (trpB) | tryptophan synthase beta-subunit 1 (TSB1) | FUNCTIONS IN: tryptophan synthase activity | INVOLVED IN: response to oxidative stress, tryptophan biosynthetic process, response to salt stress, indoleacetic acid biosynthetic process | LOCATED IN: chloroplast stroma, chloroplast | EXPRESSED IN: guard cell, root | CONTAINS InterPro DOMAIN/s: Tryptophan synthase, beta chain , Tryptophan synthase, beta chain, conserved site , Pyridoxal phosphate-dependent enzyme, beta subunit | BEST Arabidopsis thaliana protein match is: tryptophan synthase beta-subunit 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006568
IEA
InterProtryptophan metabolic process
GO:0000162
IEA
InterProtryptophan biosynthetic process
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G54810
GO:0009684
ISO
PLAZA Integrative Orthologyindoleacetic acid biosynthetic process AT5G54810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004834
IEA
InterProtryptophan synthase activity
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT5G54810
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G27070

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G27070
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G27070
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G27070
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G54810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme
IPR006654 Tryptophan synthase, beta chain
IPR023026 Tryptophan synthase beta chain/beta chain-like
IPR001926 Pyridoxal-phosphate dependent enzyme
Mapman id Description
4.1.5.3.5.2 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.tryptophan synthase heterodimer.subunit beta