Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G160 LG-1 + View
Acer truncatum Atru.chr11.635 chr11 - View
Actinidia chinensis Actinidia36644 Lachesis_group4 - View
Actinidia chinensis Actinidia12376 Lachesis_group14 + View
Arabidopsis lyrata AL1G26930 scaffold_1 - View
Arabidopsis lyrata AL5G10700 scaffold_5 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RIX96U PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT1G14900 high mobility group A Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA. high mobility group A (HMGA)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C nucleosome assembly%3B LOCATED IN: cytosol%2C nuclear chromatin%2C nucleus%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991)%2C A.T hook-like (InterPro:IPR020478)%2C AT hook%2C DNA-binding motif (InterPro:IPR017956)%2C High mobility group%2C HMG-I/HMG-Y (InterPro:IPR000116)%2C Histone H1/H5 (InterPro:IPR005818)%3B BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein (TAIR:AT3G18035.1)%3B Has 1377 Blast hits to 1228 proteins in 223 species: Archae - 0%3B Bacteria - 119%3B Metazoa - 428%3B Fungi - 179%3B Plants - 544%3B Viruses - 9%3B Other Eukaryotes - 98 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC06g31289 ChrC06 - View
Brassica carinata BcaB07g30386 ChrB07 - View
Brassica carinata BcaB07g30729 ChrB07 - View
Brassica carinata BcaC03g17058 ChrC03 + View
Brassica carinata BcaC06g34144 ChrC06 - View
Brassica napus A06p44250 A06 - View
Brassica napus C07p32220 C07 + View
Brassica napus A02p32200 A02 + View
Brassica napus A09p23550 A09 + View
Brassica oleracea BolC7t43761H C7 + View
Brassica oleracea BolC2t11057H C2 + View
Brassica rapa BraA02t08234Z A02 + View
Brassica rapa BraA09t37957Z A09 + View
Camellia sinensis var. sinensis CSS0028232 hypothetical protein ARALYDRAFT_888880 [Arabidopsis lyrata subsp. lyrata] Chr6 + View
Camellia sinensis var. sinensis CSS0002727 hypothetical protein ARALYDRAFT_888880 [Arabidopsis lyrata subsp. lyrata] Chr12 - View
Cannabis sativa CANSAT01G0504 NC_044373.1 - View
Corylus avellana Haze_10937 Similar to HMGA: HMG-Y-related protein A (Arabidopsis thaliana OX%3D3702) 9 - View
Corylus avellana Haze_14260 Similar to HMG-Y-related protein A (Glycine max OX%3D3847) 5 + View
Coffea canephora Cc11_g08210 HMG-Y-related protein A chr11 - View
Citrus clementina Ciclev10012880m.g scaffold_6 + View
Citrus clementina Ciclev10016374m.g scaffold_2 + View
Ceratophyllum demersum CDE11G0143 9 + View
Ceratophyllum demersum CDE05G0212 3 - View
Ceratophyllum demersum CDE05G1722 3 - View
Carpinus fangiana Cfa007815 Cfa03 - View
Carpinus fangiana Cfa014986 Cfa06 + View
Cardamine hirsuta CARHR015440 high mobility group A Chr1 - View
Cardamine hirsuta CARHR144160 High mobility group protein I/Y Chr5 + View
Carya illinoinensis CiPaw.05G193400 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Chr05 - View
Carya illinoinensis CiPaw.03G071700 PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Chr03 + View
Carya illinoinensis CiPaw.06G049000 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Chr06 + View
Carya illinoinensis CiPaw.04G047300 PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Chr04 + View
Citrullus lanatus ClCG01G006370 High-mobility-group family protein CG_Chr01 + View
Capsella rubella Carub.0005s0055 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED scaffold_5 + View
Capsella rubella Carub.0001s1468 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED scaffold_1 - View
Cucumis sativus L. CsaV3_5G028310 HMG-Y-related protein A chr5 - View
Daucus carota DCAR_007316 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_030245 hypothetical protein DCARv2_Chr9 + View
Davidia involucrata Dinv28206 GWHABJS00000012 - View
Davidia involucrata Dinv28051 GWHABJS00000008 - View
Durio zibethinus Duzib268G0926 NW_019168270.1 + View
Durio zibethinus Duzib211G0031 NW_019168049.1 - View
Durio zibethinus Duzib251G0855 NW_019167971.1 + View
Durio zibethinus Duzib133G0405 NW_019167938.1 - View
Eucalyptus grandis Eucgr.B02941 Chr02 - View
Eucalyptus grandis Eucgr.J01599 Chr10 + View
Erythranthe guttata Migut.L00405 scaffold_12 - View
Eutrema salsugineum Thhalv10004909m.g PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED scaffold_6 - View
Eutrema salsugineum Thhalv10008756m.g PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED scaffold_5 + View
Fragaria x ananassa FAN07G1995 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Fvb4-4 + View
Fragaria vesca FvH4_4g34011 Fvb4 - View
Gossypium hirsutum Gohir.D12G154900 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED D12 + View
Gossypium hirsutum Gohir.A12G151200 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED A12 + View
Glycine max Glyma.02G245000 PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Gm02 + View
Glycine max Glyma.18G040200 PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Gm18 + View
Gossypium raimondii Gorai.008G167300 Chr08 + View
Helianthus annuus HanXRQChr15g0476791 Putative winged helix-turn-helix DNA-binding domain; AT hook-like HanXRQChr15 - View
Hydrangea macrophylla Hma1.2p1_0158F.1_g070210 Hma1.2p1_0158F.1 - View
Lotus japonicus Lj6g0005170 PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED chr6 + View
Lonicera japonica Lj6P742T14 GWHAAZE00000006 + View
Lonicera japonica Lj3C866T11 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_8_44400 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_2_69361 PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_3_55821 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Lsat_1_v8_lg_3 + View
Malus domestica MD16G1022400 high mobility group A Chr16 - View
Malus domestica MD09G1263200 high mobility group A Chr09 - View
Malus domestica MD13G1021100 high mobility group A Chr13 - View
Manihot esculenta Manes.17G080900 Chromosome17 + View
Manihot esculenta Manes.01G118200 Chromosome01 + View
Manihot esculenta Manes.02G076600 Chromosome02 + View
Manihot esculenta Manes.15G131700 Chromosome15 + View
Nelumbo nucifera Nn3g18299 chr3 + View
Nicotiana tabacum Nitab4.5_0000916g0110 Linker histone H1/H5, domain H15, AT hook, DNA-binding motif, AT hook-like, Winged helix-turn-helix DNA-binding domain Nitab4.5_0000916 - View
Olea europaea Oeu062635.1 chr11 - View
Petunia axillaris Peaxi162Scf00723g00045 high mobility group A Peaxi162Scf00723 + View
Punica granatum PGR102G2096 NC_045129.1 - View
Punica granatum PGR004G0693 NC_045131.1 - View
Prunus persica Prupe.1G330600 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Pp01 + View
Populus trichocarpa Potri.004G087500 PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Chr04 - View
Populus trichocarpa Potri.010G109600 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Chr10 - View
Populus trichocarpa Potri.008G132400 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Chr08 + View
Phaseolus vulgaris Phvul.001G230300 PTHR11467//PTHR11467:SF49 - HISTONE H1/H5 // SUBFAMILY NOT NAMED Chr01 - View
Quercus lobata QL03p034015 3 + View
Quercus lobata QL02p058120 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr4g0443521 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim09G0093400 chr09 - View
Salvia bowleyana SalBow8G3625 GWHASIU00000004 + View
Salix brachista Sabra08G0101000 GWHAAZH00000008 + View
Salix brachista Sabra10G0080100 GWHAAZH00000010 - View
Salix brachista Sabra17G0107800 GWHAAZH00000017 + View
Sechium edule Sed0021324 LG03 - View
Sechium edule Sed0022114 LG11 - View
Sechium edule Sed0026446 LG06 + View
Schrenkiella parvula Sp2g13050 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED ch2-4 + View
Schrenkiella parvula Sp1g13340 PTHR11467//PTHR11467:SF29 - HISTONE H1/H5 // SUBFAMILY NOT NAMED ch1-1 - View
Solanum pennellii Sopen04g003030 Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA. | high mobility group A (HMGA) | FUNCTIONS IN: DNA binding | INVOLVED IN: regulation of transcription, DNA-dependent, nucleosome assembly | LOCATED IN: cytosol, nuclear chromatin, nucleus | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding , A.T hook-like , AT hook, DNA-binding motif , High mobility group, HMG-I/HMG-Y , Histone H1/H5 | BEST Arabidopsis thaliana protein match is: winged-helix DNA-binding transcription factor family protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400029519 High mobility group family ST4.03ch04 + View
Selenicereus undatus Hund24960 Scaffold_3410 - View
Trochodendron aralioides TAR371G1156 group13 - View
Trochodendron aralioides TAR622G1368 group8 - View
Trochodendron aralioides TAR374G1087 group12 + View
Trochodendron aralioides TAR629G1426 group0 + View
Theobroma cacao Thecc.04G115000 High mobility group A Chromosome_4 - View
Theobroma cacao Thecc.02G288200 Chromosome_2 + View
Tarenaya hassleriana THA.LOC104805075 HMG-Y-related protein A-like NW_010961290.1 + View
Tarenaya hassleriana THA.LOC104824134 HMG-Y-related protein A-like NW_010966881.1 - View
Tripterygium wilfordii TWI74G0932 NC_052234.1 + View
Tripterygium wilfordii TWI74G0359 NC_052234.1 - View
Tripterygium wilfordii TWI77G0347 NC_052236.1 + View
Vaccinium macrocarpon vmacro10672 Similar to HMGA: HMG-Y-related protein A (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01011701001 chr1 + View