Gene: Cc11_g08210

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc11_g08210
  • Transcript Identifier Cc11_g08210.1
  • Gene Type Coding gene
  • Location chr11 : 25539838-25540882 : negative

Gene Family Information

  • ID HOM05D002447
  • #Genes/#Species 278/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q10370
  • UniProtKB Q00423
  • UniProtKB B9HJD9
  • UniProtKB D7KCK8
  • UniProtKB Q9SEH2
  • id GSCOCG00032907001

Descriptions

  • Description HMG-Y-related protein A
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
InterPronucleosome assembly
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:2000014
ISO
PLAZA Integrative Orthologyregulation of endosperm development Zm00001eb041850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding Zm00001eb041850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0000785
IEA
InterProchromatin
GO:0005634
IEA
InterPronucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G14900
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus Zm00001eb041850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005818 Linker histone H1/H5, domain H15
IPR000116 High mobility group protein HMGA
IPR017956 AT hook, DNA-binding motif
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR031059 High mobility group protein HMGA, plant
Mapman id Description
35.1 not assigned.annotated