Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G15300 LG-1 + View
Acer truncatum Atru.chr3.560 chr3 - View
Arabidopsis lyrata AL5G30830 scaffold_5 - View
Arabidopsis thaliana AT3G50670 U1 small nuclear ribonucleoprotein-70K Encodes U1 snRNP 70K U1 small nuclear ribonucleoprotein-70K (U1-70K)%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: nuclear mRNA splicing%2C via spliceosome%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: U1 small nuclear ribonucleoprotein of 70kDa MW N-terminal (InterPro:IPR022023)%2C RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT2G43370.1)%3B Has 287 Blast hits to 284 proteins in 72 species: Archae - 6%3B Bacteria - 66%3B Metazoa - 0%3B Fungi - 0%3B Plants - 156%3B Viruses - 0%3B Other Eukaryotes - 59 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC04g23156 ChrC04 + View
Corylus avellana Haze_15104 Similar to RNU1: U1 small nuclear ribonucleoprotein 70 kDa (Arabidopsis thaliana OX%3D3702) 11 - View
Cardamine hirsuta CARHR280960 U1 small nuclear ribonucleoprotein 70 kDa, putative Chr8 - View
Citrullus lanatus ClCG01G019460 U1 small nuclear ribonucleoprotein 70 kDa, putative CG_Chr01 + View
Cucumis melo MELO3C007821.2 U1 small nuclear ribonucleoprotein 70 kDa chr08 + View
Capsella rubella Carub.0005s1700 K11093 - U1 small nuclear ribonucleoprotein 70kDa (SNRP70) scaffold_5 - View
Cucumis sativus L. CsaV3_6G046180 U1 small nuclear ribonucleoprotein 70 kDa chr6 + View
Daucus carota DCAR_017262 hypothetical protein DCARv2_Chr5 + View
Durio zibethinus Duzib187G1223 NW_019167860.1 + View
Erigeron canadensis ECA238G3955 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.H01267 Chr08 - View
Eutrema salsugineum Thhalv10010375m.g K11093 - U1 small nuclear ribonucleoprotein 70kDa (SNRP70) scaffold_16 + View
Eutrema salsugineum Thhalv10004249m.g K11093 - U1 small nuclear ribonucleoprotein 70kDa (SNRP70) scaffold_6 + View
Fragaria x ananassa FAN28G1132 K11093 - U1 small nuclear ribonucleoprotein 70kDa (SNRP70) Fvb1-1 + View
Fragaria x ananassa FAN23G0698 PF00076//PF12220 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // U1 small nuclear ribonucleoprotein of 70kDa MW N terminal (U1snRNP70_N) Fvb1-3 + View
Gossypium hirsutum Gohir.D10G092700 K11093 - U1 small nuclear ribonucleoprotein 70kDa (SNRP70) D10 + View
Gossypium hirsutum Gohir.A10G095200 K11093 - U1 small nuclear ribonucleoprotein 70kDa (SNRP70) A10 - View
Gossypium raimondii Gorai.011G101900 Chr11 + View
Lonicera japonica Lj4A199T81 GWHAAZE00000004 + View
Salix brachista Sabra07G0023600 GWHAAZH00000007 - View
Salix brachista Sabra05G0102100 GWHAAZH00000005 - View
Simmondsia chinensis Sc16g0000910 GWHAASQ00000016 - View
Schrenkiella parvula Sp5g11550 K11093 - U1 small nuclear ribonucleoprotein 70kDa (SNRP70) ch5-1 + View
Schrenkiella parvula Sp2g29940 K11093 - U1 small nuclear ribonucleoprotein 70kDa (SNRP70) ch2-4 - View
Solanum tuberosum PGSC0003DMG400014893 U1 small nuclear ribonucleoprotein 70 kDa ST4.03ch02 + View
Selenicereus undatus Hund14148 Scaffold_33679 + View