Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lj1C184T3 GWHAAZE00000001 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G14680 LG-4 - View
Acer truncatum Atru.chr3.3695 chr3 - View
Actinidia chinensis Actinidia24077 Lachesis_group24 + View
Actinidia chinensis Actinidia07112 Lachesis_group13 + View
Actinidia chinensis Actinidia33851 Lachesis_group15 + View
Arabidopsis lyrata AL5G24010 scaffold_5 - View
Avicennia marina MSTRG.17860 ScioBoG_19834_HRSCAF_19925 + View
Aquilegia oxysepala Aqoxy4G03199 CHR04 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PRB4HP PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ARC7JY PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT5G60250 zinc finger (C3HC4-type RING finger) family protein zinc finger (C3HC4-type RING finger) family protein%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C C6HC-type (InterPro:IPR002867)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C Polynucleotidyl transferase%2C ribonuclease H fold (InterPro:IPR012337)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G25370.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G45460 IBR domain containing protein IBR domain containing protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: flower%3B EXPRESSED DURING: petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C6HC-type (InterPro:IPR002867)%3B BEST Arabidopsis thaliana protein match is: RING/U-box protein with C6HC-type zinc finger (TAIR:AT3G45480.1)%3B Has 1686 Blast hits to 1674 proteins in 179 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 656%3B Fungi - 285%3B Plants - 509%3B Viruses - 0%3B Other Eukaryotes - 236 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB01g01084 ChrB01 + View
Brassica carinata BcaC01g01968 ChrC01 + View
Brassica napus A06p21350 A06 + View
Brassica napus C03p12950 C03 - View
Brassica napus A03p11260 A03 - View
Brassica napus C03p69970 C03 - View
Brassica napus A10p17320 A10 - View
Brassica oleracea BolC3t19257H C3 - View
Brassica rapa BraA03t10438Z A03 - View
Brassica rapa BraA06t25224Z A06 + View
Brassica rapa BraA10t43817Z A10 - View
Beta vulgaris EL10Ac9g22443 PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0041180 PREDICTED: uncharacterized protein LOC105170690 [Sesamum indicum] Chr4 - View
Camellia sinensis var. sinensis CSS0010185 zinc finger protein, putative [Ricinus communis] Chr11 - View
Cannabis sativa CANSAT54G1419 NC_044375.1 + View
Corylus avellana Haze_23921 Protein of unknown function 6 - View
Coffea canephora Cc01_g11580 Putative zinc finger (C3HC4-type RING finger) family protein chr1 - View
Citrus clementina Ciclev10028109m.g scaffold_8 - View
Carpinus fangiana Cfa011368 Cfa04 - View
Cardamine hirsuta CARHR273840 RING zinc finger-containing protein Chr8 - View
Carya illinoinensis CiPaw.13G106600 PF01485//PF13456 - IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) Chr13 + View
Citrullus lanatus ClCG02G020920 RING/U-box superfamily protein CG_Chr02 + View
Citrullus lanatus ClCG03G002380 RING/U-box superfamily protein CG_Chr03 + View
Cucumis melo MELO3C005007.2 Zinc finger family protein, putative chr12 + View
Cucumis melo MELO3C025743.2 Zinc finger protein, putative chr11 + View
Carica papaya Cpa.g.sc139.61 supercontig_139 + View
Chenopodium quinoa AUR62006509 At4g01020: ATP-dependent RNA helicase DEAH11, chloroplastic C_Quinoa_Scaffold_3429 + View
Chenopodium quinoa AUR62025020 At4g01020: ATP-dependent RNA helicase DEAH11, chloroplastic C_Quinoa_Scaffold_4082 - View
Capsella rubella Carub.0005s1128 PF00097//PF01485//PF13456 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) scaffold_5 - View
Cucumis sativus L. CsaV3_6G021590 RBR-type E3 ubiquitin transferase chr6 + View
Cucumis sativus L. CsaV3_1G013060 RBR-type E3 ubiquitin transferase chr1 + View
Daucus carota DCAR_006039 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv32794 GWHABJS00000010 - View
Davidia involucrata Dinv06223 GWHABJS00000007 + View
Durio zibethinus Duzib150G1357 NW_019167882.1 + View
Eucalyptus grandis Eucgr.B02466 Chr02 + View
Eucalyptus grandis Eucgr.J00956 Chr10 - View
Erythranthe guttata Migut.N02622 scaffold_14 + View
Eutrema salsugineum Thhalv10002779m.g scaffold_4 + View
Eutrema salsugineum Thhalv10012895m.g PF01485//PF13456 - IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) scaffold_2 - View
Fragaria x ananassa FAN11G2781 PF00097//PF01485//PF13456 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) Fvb3-4 + View
Fragaria x ananassa FAN16G3310 PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED Fvb3-3 - View
Fragaria vesca FvH4_3g33450 PF00097//PF01485//PF13456 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) Fvb3 - View
Gossypium hirsutum Gohir.A07G116101 PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED A07 + View
Gossypium hirsutum Gohir.D09G102800 PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED D09 + View
Gossypium hirsutum Gohir.D07G097600 PTHR11685:SF133 - C3H4 TYPE ZINC FINGER PROTEIN D07 + View
Gossypium hirsutum Gohir.D07G120500 PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED D07 + View
Glycine max Glyma.12G071900 PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED Gm12 - View
Glycine max Glyma.11G152542 PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED Gm11 + View
Gossypium raimondii Gorai.001G129800 Chr01 + View
Gossypium raimondii Gorai.001G105000 Chr01 + View
Gossypium raimondii Gorai.006G120800 Chr06 - View
Lupinus albus Lalb_Chr01g0004151 PTHR11685//PTHR11685:SF107 - RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING // C3H4 TYPE ZINC FINGER PROTEIN-RELATED Lalb_Chr01 + View
Lotus japonicus Lj3g0021675 PF00097//PF01485//PF13456 - Zinc finger, C3HC4 type (RING finger) (zf-C3HC4) // IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) chr3 + View
Lactuca sativa Lsat_1_v5_gn_6_26441 PTHR11685:SF107 - C3H4 TYPE ZINC FINGER PROTEIN-RELATED Lsat_1_v8_lg_6 + View
Malus domestica MD03G1111900 RING/U-box superfamily protein Chr03 - View
Malus domestica MD11G1125600 zinc finger (C3HC4-type RING finger) family protein Chr11 + View
Manihot esculenta Manes.11G140900 Chromosome11 + View
Manihot esculenta Manes.04G025200 Chromosome04 - View
Nelumbo nucifera Nn2g10675 chr2 + View
Olea europaea Oeu005911.1 chr4 - View
Petunia axillaris Peaxi162Scf00389g00082 RING/U-box protein with C6HC-type zinc finger Peaxi162Scf00389 + View
Punica granatum PGR102G1122 NC_045129.1 + View
Punica granatum PGR119G0050 NC_045132.1 - View
Prunus persica Prupe.6G094100 PF01485//PF04434//PF13456 - IBR domain, a half RING-finger domain (IBR) // SWIM zinc finger (SWIM) // Reverse transcriptase-like (RVT_3) Pp06 + View
Pisum sativum Psat7g223200 Reverse transcriptase-like chr7LG7 + View
Papaver somniferum PSO063G6856 NC_039364.1 - View
Phaseolus vulgaris Phvul.011G072300 Chr11 + View
Quercus lobata QL01p037014 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0060811 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0092000 chr13 + View
Rhododendron simsii Rhsim01G0220400 chr01 - View
Striga asiatica SGA_v2.0_scaffold2G00921 scaffold2 + View
Salvia bowleyana SalBow3G1631 GWHASIU00000006 + View
Sechium edule Sed0010914 LG01 + View
Sechium edule Sed0027187 LG05 - View
Sapria himalayana SHI06041 scaffold2_22354274 + View
Solanum lycopersicum Solyc06g005000.3 RBR-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2I4EHJ4_9ROSI) SL4.0ch06 + View
Schrenkiella parvula Sp6g21870 PF01485//PF13456 - IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) ch6-6 + View
Schrenkiella parvula Sp5g15900 PF01485//PF13456 - IBR domain, a half RING-finger domain (IBR) // Reverse transcriptase-like (RVT_3) ch5-1 + View
Solanum pennellii Sopen06g001010 zinc finger (C3HC4-type RING finger) family protein | FUNCTIONS IN: zinc ion binding, nucleic acid binding | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, C6HC-type , Zinc finger, RING-type , Polynucleotidyl transferase, ribonuclease H fold | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400023248 Zinc finger protein ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400027373 Zinc finger family protein ST4.03ch11 - View
Trochodendron aralioides TAR633G1515 group2 + View
Theobroma cacao Thecc.09G260500 Zinc finger family protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104810839 uncharacterized protein LOC104810839 NW_010965304.1 + View
Tripterygium wilfordii TWI79G0034 NC_052238.1 + View
Tripterygium wilfordii TWI31G0941 NC_052233.1 + View
Tripterygium wilfordii TWI75G1725 NC_052253.1 + View
Vaccinium macrocarpon vmacro14469 Similar to DDB_G0292642: Uncharacterized protein DDB_G0292642 (Dictyostelium discoideum OX%3D44689) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro03167 Protein of unknown function chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G0662 CM024076.1 + View
Vitis vinifera GSVIVG01025129001 chr6 - View