Gene: CANSAT54G1419

General Information

Structural Information

Species Cannabis sativa
Gene Identifier CANSAT54G1419
Transcript Identifier CANSAT54G1419.01
Gene Type Coding gene
Location NC_044375.1 : 92365521-92368497 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000327
#Genes/#Species 1418/97
Phylogenetic origin

ID ORTHO05D000218
#Genes/#Species 1364/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid rna-XM_030650595.1
pid XP_030506455.1
id gene-LOC115721325

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016567	IEA	InterPro	protein ubiquitination

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0004523	IEA	InterPro	RNA-DNA hybrid ribonuclease activity
GO:0004842	IEA	InterPro	ubiquitin-protein transferase activity
GO:0061630	ISO	PLAZA Integrative Orthology	ubiquitin protein ligase activity	AT3G43750
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G43750

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT3G43750

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR002156	Ribonuclease H domain
IPR031127	E3 ubiquitin ligase RBR family
IPR036397	Ribonuclease H superfamily
IPR002867	IBR domain
IPR012337	Ribonuclease H-like superfamily

Mapman id	Description
19.2.2.1.4.4.4	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RBR-type E3 ligase activities.plant-specific E3 ubiquitin ligase (RSL/RFA)