Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0011669 PREDICTED: histone deacetylase HDT1-like [Sesamum indicum] Chr4 + View
CSS0026506 PREDICTED: histone deacetylase HDT1-like [Sesamum indicum] Chr11 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G21510 LG-1 - View
Acer truncatum Atru.chr3.3388 chr3 + View
Acer truncatum Atru.chr8.1641 chr8 + View
Arabidopsis lyrata AL6G13270 scaffold_6 + View
Avicennia marina MSTRG.19226 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.26653 ScioBoG_52287_HRSCAF_52434 + View
Avicennia marina MSTRG.10350 ScioBoG_13798_HRSCAF_13862 - View
Aquilegia oxysepala Aqoxy2G01426 CHR02 + View
Aquilegia oxysepala Aqoxy1G00951 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.FWC0NE PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED arahy.Tifrunner.gnm1.Arahy.06 + View
Arabidopsis thaliana AT5G03740 histone deacetylase 2C HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression histone deacetylase 2C (HD2C)%3B FUNCTIONS IN: histone deacetylase activity%2C transcription repressor activity%2C zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: response to water deprivation%2C response to salt stress%2C response to abscisic acid stimulus%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: histone deacetylase 3 (TAIR:AT3G44750.2)%3B Has 47549 Blast hits to 20091 proteins in 1212 species: Archae - 111%3B Bacteria - 17827%3B Metazoa - 12467%3B Fungi - 4889%3B Plants - 1882%3B Viruses - 518%3B Other Eukaryotes - 9855 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g32081 ChrC06 + View
Brassica napus C09p73180 C09 - View
Brassica napus A10p32360 A10 - View
Brassica oleracea BolC9t60053H C9 - View
Brassica rapa BraA10t45276Z A10 - View
Beta vulgaris EL10Ac7g16997 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED Chr7_EL10_PGA_scaffold5 + View
Capsicum annuum CAN.G824.24 PGAv.1.6.scaffold824 - View
Cannabis sativa CANSAT54G1531 NC_044375.1 + View
Cannabis sativa CANSAT80G0408 NC_044372.1 - View
Cicer arietinum L. Ca_08965_v3 Ca_LG3_v3 - View
Cicer arietinum L. Ca_01682_v3 Ca_LG1_v3 + View
Corylus avellana Haze_19531 Similar to HDT1: Histone deacetylase HDT1 (Glycine max OX%3D3847) 10 - View
Coffea canephora Cc06_g05190 Histone deacetylase HDT1 chr6 - View
Citrus clementina Ciclev10012182m.g scaffold_6 + View
Citrus clementina Ciclev10028932m.g scaffold_8 + View
Ceratophyllum demersum CDE06G2425 4 + View
Carpinus fangiana Cfa016530 Cfa07 - View
Cardamine hirsuta CARHR209560 histone deacetylase 2C Chr6 - View
Carya illinoinensis CiPaw.09G008200 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED Chr09 - View
Citrullus lanatus ClCG10G019420 Histone deacetylase 2a, putative CG_Chr10 + View
Cucumis melo MELO3C021457.2 histone deacetylase HDT1-like chr11 - View
Cucumis melo MELO3C009430.2 histone deacetylase HDT1 chr04 + View
Corchorus olitorius COL.COLO4_29822 histone deacetylase HDT1-like protein AWUE01020406.1 + View
Carica papaya Cpa.g.sc5.85 supercontig_5 + View
Chenopodium quinoa AUR62033584 HDT1: Histone deacetylase HDT1 C_Quinoa_Scaffold_1776 + View
Chenopodium quinoa AUR62041415 HDT1: Histone deacetylase HDT1 C_Quinoa_Scaffold_3863 - View
Cucumis sativus L. CsaV3_6G014670 histone deacetylase HDT1-like chr6 - View
Cucumis sativus L. CsaV3_3G036760 histone deacetylase HDT1 chr3 - View
Daucus carota DCAR_020779 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv21263 GWHABJS00000021 + View
Davidia involucrata Dinv19823 GWHABJS00000015 - View
Durio zibethinus Duzib093G2204 NW_019167937.1 + View
Durio zibethinus Duzib170G0280 NW_019167871.1 + View
Erigeron canadensis ECA248G1510 Conyza_canadensis_scaffold:9 - View
Erythranthe guttata Migut.J00993 scaffold_10 + View
Erythranthe guttata Migut.L01752 scaffold_12 - View
Eutrema salsugineum Thhalv10014245m.g PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED scaffold_2 + View
Eutrema salsugineum Thhalv10017218m.g PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED scaffold_10 + View
Fragaria x ananassa FAN14G1368 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED Fvb6-1 - View
Fragaria x ananassa FAN11G2589 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED Fvb3-4 - View
Fragaria x ananassa FAN02G0070 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Fvb6-4 + View
Fragaria x ananassa FAN05G5765 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED Fvb6-3 + View
Fragaria x ananassa FAN05G4964 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED Fvb6-3 + View
Fragaria x ananassa FAN09G2940 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Fvb6-2 + View
Fragaria vesca FvH4_6g17790 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED Fvb6 - View
Gossypium hirsutum Gohir.A01G209500 PF03066 - Nucleoplasmin (Nucleoplasmin) A01 + View
Gossypium hirsutum Gohir.D01G198600 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED D01 + View
Glycine max Glyma.19G191000 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Gm19 - View
Glycine max Glyma.03G190700 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Gm03 - View
Glycine max Glyma.12G181400 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Gm12 - View
Gossypium raimondii Gorai.002G242800 Chr02 + View
Gossypium raimondii Gorai.009G088600 Chr09 - View
Helianthus annuus HanXRQChr11g0351121 Putative zinc finger, C2H2 HanXRQChr11 - View
Lupinus albus Lalb_Chr20g0112191 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED Lalb_Chr20 + View
Lotus japonicus Lj1g0014712 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED chr1 + View
Lotus japonicus Lj3g0001709 K11276 - nucleophosmin 1 (NPM1) chr3 + View
Lonicera japonica Lj2C128T7 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_1_50361 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Lsat_1_v8_lg_1 - View
Magnolia biondii MBI17_g11106_MAGBIO AED:0.07 Chr17 + View
Malus domestica MD12G1016900 histone deacetylase 2C Chr12 - View
Malus domestica MD14G1014900 histone deacetylase 2C Chr14 - View
Malus domestica MD03G1134300 histone deacetylase 3 Chr03 - View
Malus domestica MD11G1156500 histone deacetylase 2C Chr11 - View
Manihot esculenta Manes.11G156700 Chromosome11 - View
Manihot esculenta Manes.09G060536 Chromosome09 + View
Nelumbo nucifera Nn2g13988 chr2 - View
Nicotiana tabacum Nitab4.5_0001922g0030 Zinc finger, C2H2 Nitab4.5_0001922 + View
Petunia axillaris Peaxi162Scf00433g00087 histone deacetylase 2C Peaxi162Scf00433 + View
Punica granatum PGR119G1578 NC_045132.1 + View
Prunus persica Prupe.7G118500 Pp07 + View
Prunus persica Prupe.6G118700 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Pp06 - View
Pisum sativum Psat3g036720 Unknown gene chr3LG5 + View
Papaver somniferum PSO339G0838 NC_039366.1 - View
Papaver somniferum PSO063G4060 NC_039364.1 - View
Papaver somniferum PSO384G0416 NC_039368.1 + View
Populus trichocarpa Potri.009G149400 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Chr09 + View
Populus trichocarpa Potri.006G116500 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Chr06 + View
Populus trichocarpa Potri.004G188800 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Chr04 + View
Phaseolus vulgaris Phvul.001G186300 PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED Chr01 - View
Quercus lobata QL07p040656 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0472041 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim03G0081700 chr03 + View
Rhododendron simsii Rhsim04G0136200 chr04 + View
Striga asiatica SGA_v2.0_scaffold40G15411 scaffold40 + View
Striga asiatica SGA_v2.0_scaffold184G39914 scaffold184 - View
Striga asiatica SGA_v2.0_scaffold75G24799 scaffold75 + View
Salvia bowleyana SalBow3G0353 GWHASIU00000006 + View
Salix brachista Sabra06G0090900 GWHAAZH00000006 + View
Simmondsia chinensis Sc20g0006000 GWHAASQ00000020 - View
Sechium edule Sed0003899 LG04 - View
Solanum lycopersicum Solyc09g009030.4 Histone deacetylase HDT1 (AHRD V3.3 *** HDT1_SOLCH) SL4.0ch09 - View
Solanum lycopersicum Solyc10g085560.3 Histone deacetylase HDT1 (AHRD V3.3 *** A0A2G3BFH9_CAPCH) SL4.0ch10 - View
Schrenkiella parvula Sp6g38980 PTHR31802//PTHR31802:SF5 - FAMILY NOT NAMED // HISTONE DEACETYLASE HDT2-RELATED ch6-6 - View
Solanum pennellii Sopen10g034970 Histone deacetylase 2a (HD2a) (Nucleolar histone deacetylase HD2-p39) - Glycine max (Soybean), Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots. | histone deacetylase 3 (HDA3) | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type , Nucleoplasmin | BEST Arabidopsis thaliana protein match is: histone deacetylase 2B . Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400002684 Histone deacetylase HDT1 ST4.03ch09 + View
Solanum tuberosum PGSC0003DMG400008398 Histone deacetylase HDT1 ST4.03ch10 + View
Trochodendron aralioides TAR633G0649 group2 + View
Trochodendron aralioides TAR636G1096 group1 - View
Trochodendron aralioides TAR369G0885 group18 - View
Theobroma cacao Thecc.05G080400 Histone deacetylase 2C Chromosome_5 - View
Theobroma cacao Thecc.09G292300 Histone deacetylase 2C Chromosome_9 + View
Tarenaya hassleriana THA.LOC104816375 histone deacetylase HDT3 isoform X1 NW_010965775.1 + View
Trifolium pratense TPR.G10243 Tp57577_TGAC_v2_LG6 + View
Tripterygium wilfordii TWI75G0541 NC_052253.1 - View
Tripterygium wilfordii TWI74G1258 NC_052234.1 - View
Utricularia gibba unitig_22.g5116 unitig_22 - View
Vaccinium macrocarpon vmacro07367 Similar to HDT1: Histone deacetylase HDT1 (Solanum chacoense OX%3D4108) scaffold00230_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G2827 CM024070.1 - View
Vitis vinifera GSVIVG01033775001 chr8 + View