Gene: CANSAT54G1531

General Information

Structural Information

  • Species Cannabis sativa
  • Gene Identifier CANSAT54G1531
  • Transcript Identifier CANSAT54G1531.01
  • Gene Type Coding gene
  • Location NC_044375.1 : 2279447-2281379 : positive

Gene Family Information

  • ID HOM05D001688
  • #Genes/#Species 383/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna-XM_030648380.1
  • pid XP_030504240.1
  • id gene-LOC115719367

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT2G27840
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G22650
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G03740
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G03740
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT5G22650
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT5G22650
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G03740
GO:0009944
ISO
PLAZA Integrative Orthologypolarity specification of adaxial/abaxial axis AT5G22650
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G03740
GO:0010162
ISO
PLAZA Integrative Orthologyseed dormancy process AT5G22650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004407
ISO
PLAZA Integrative Orthologyhistone deacetylase activity AT5G22650
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G22650
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G03740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G22650
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G22650
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G22650
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G22650
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G22650
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G22650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036824 Nucleoplasmin core domain superfamily
IPR041232 Nucleoplasmin-like domain
Mapman id Description
12.3.2.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD2 histone deacetylase