Gene: Potri.006G116500

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.006G116500
  • Transcript Identifier Potri.006G116500.1
  • Gene Type Coding gene
  • Location Chr06 : 9098481-9101117 : positive

Gene Family Information

  • ID HOM05D001688
  • #Genes/#Species 383/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.006G116500.v4.1
  • pacid 42769154
  • synonym POPTR_0006s11770

Descriptions

  • Description PTHR31802:SF5 - HISTONE DEACETYLASE HDT2-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G03740
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G03740
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G03740
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT5G03740
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G03740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G03740
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT5G03740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G03740

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041232 Nucleoplasmin-like domain
IPR013087 Zinc finger C2H2-type
Mapman id Description
12.3.2.2 Chromatin organisation.post-translational histone modification.histone deacetylation.HD2 histone deacetylase