Gene: SGA_v2.0_scaffold75G24799
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold75G24799
- Transcript Identifier SGA_v2.0_scaffold75T24799
- Gene Type Coding gene
- Location scaffold75 : 331407-334193 : positive
Gene Family Information
- ID HOM05D001688
- #Genes/#Species 383/97
- Phylogenetic origin
- ID ORTHO05D001571
- #Genes/#Species 387/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product Histone deacetylase HDT1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT5G03740 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT5G03740 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT5G03740 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT5G03740 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT5G03740 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G03740 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G03740 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G03740 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041232 | Nucleoplasmin-like domain |
| Mapman id | Description |
|---|---|
| 12.3.2.2 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD2 histone deacetylase |