Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0022730 PREDICTED: probable ATP-dependent DNA helicase CHR12 [Vitis vinifera] Chr5 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G16490 LG-5 - View
Acer truncatum Atru.chr4.2520 chr4 - View
Actinidia chinensis Actinidia40166 Lachesis_group22 + View
Actinidia chinensis Actinidia23492 Lachesis_group3 - View
Arabidopsis lyrata AL3G16830 scaffold_3 - View
Arabidopsis lyrata AL6G30790 scaffold_6 + View
Avicennia marina MSTRG.4011 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.10001 ScioBoG_12795_HRSCAF_12848 - View
Aquilegia oxysepala Aqoxy2G03333 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JYJ007 PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.I4QQIE PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6R1BCK PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CDG6HX PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT3G06010 SNF2/Brahma-type chromatin-remodeling protein CHR12 Encodes AtCHR12%2C a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress. ATCHR12%3B FUNCTIONS IN: helicase activity%2C DNA binding%2C nucleic acid binding%2C ATP binding%3B INVOLVED IN: response to water deprivation%2C response to salt stress%2C response to heat%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%2C SNF2-related (InterPro:IPR000330)%3B BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT5G19310.1)%3B Has 23556 Blast hits to 19403 proteins in 2220 species: Archae - 141%3B Bacteria - 6122%3B Metazoa - 5759%3B Fungi - 4503%3B Plants - 1859%3B Viruses - 268%3B Other Eukaryotes - 4904 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G19310 homeotic protein regulator Encodes CHR23. Overexpression results in increased variability of growth and gene expression. Homeotic gene regulator%3B FUNCTIONS IN: helicase activity%2C DNA binding%2C ATP binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: DEAD-like helicase%2C N-terminal (InterPro:IPR014001)%2C DNA/RNA helicase%2C C-terminal (InterPro:IPR001650)%2C Helicase%2C superfamily 1/2%2C ATP-binding domain (InterPro:IPR014021)%2C SNF2-related (InterPro:IPR000330)%3B BEST Arabidopsis thaliana protein match is: Homeotic gene regulator (TAIR:AT3G06010.1)%3B Has 29243 Blast hits to 22828 proteins in 2261 species: Archae - 168%3B Bacteria - 6495%3B Metazoa - 7843%3B Fungi - 5018%3B Plants - 2070%3B Viruses - 244%3B Other Eukaryotes - 7405 (source: NCBI BLink). Chr5 + View
Amborella trichopoda ATR0626G379 AmTr_v1.0_scaffold00025 + View
Brassica napus C05p61250 C05 + View
Beta vulgaris EL10As3g23347 PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 Scaffold_0003 - View
Capsicum annuum CAN.G69.9 PGAv.1.6.scaffold69 - View
Cannabis sativa CANSAT78G1321 NC_044376.1 + View
Cicer arietinum L. Ca_10932_v3 Ca_LG4_v3 - View
Corylus avellana Haze_00933 Similar to CHR12: Probable ATP-dependent DNA helicase CHR12 (Arabidopsis thaliana OX%3D3702) 1 - View
Citrus clementina Ciclev10004335m.g scaffold_9 + View
Carpinus fangiana Cfa015609 Cfa06 + View
Cardamine hirsuta CARHR193660 chromatin-remodeling protein 11 Chr6 - View
Cardamine hirsuta CARHR080510 Chromodomain-helicase-DNA-binding protein 2 Chr3 - View
Carya illinoinensis CiPaw.01G162800 PF00176//PF00271//PF04851//PF14619 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) // Type III restriction enzyme, res subunit (ResIII) // Snf2-ATP coupling, chromatin remodelling complex (SnAC) Chr01 + View
Carya illinoinensis CiPaw.02G094700 K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) Chr02 + View
Citrullus lanatus ClCG06G005980 Chromodomain-helicase-DNA-binding protein 2 CG_Chr06 + View
Capsella rubella Carub.0003s0543 K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) scaffold_3 - View
Capsella rubella Carub.0006s1764 K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) scaffold_6 + View
Cucumis sativus L. CsaV3_6G038290 Chromatin remodeling factor, putative chr6 - View
Daucus carota DCAR_027168 hypothetical protein DCARv2_Chr8 + View
Daucus carota DCAR_002397 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv38416 GWHABJS00000016 - View
Davidia involucrata Dinv44505 GWHABJS00000014 - View
Durio zibethinus Duzib212G0338 NW_019168026.1 - View
Durio zibethinus Duzib151G0379 NW_019167904.1 + View
Eucalyptus grandis Eucgr.B01100 Chr02 - View
Erythranthe guttata Migut.G00313 scaffold_7 + View
Eutrema salsugineum Thhalv10019947m.g K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) scaffold_13 + View
Eutrema salsugineum Thhalv10015665m.g K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) scaffold_2 + View
Fragaria x ananassa FAN22G2243 PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 Fvb4-1 - View
Fragaria x ananassa FAN17G1856 PTHR10799//PTHR10799:SF640 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // NUCLEAR PROTEIN STH1/NPS1 Fvb4-2 + View
Fragaria x ananassa FAN07G1560 PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 Fvb4-4 + View
Fragaria vesca FvH4_4g14970 PTHR10799//PTHR10799:SF640 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // NUCLEAR PROTEIN STH1/NPS1 Fvb4 + View
Glycine max Glyma.10G250500 3.6.4.11//3.6.4.12 - Nucleoplasmin ATPase // DNA helicase Gm10 - View
Glycine max Glyma.20G143200 PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 Gm20 + View
Glycine max Glyma.11G004100 3.6.4.11//3.6.4.12 - Nucleoplasmin ATPase // DNA helicase Gm11 + View
Lotus japonicus Lj1g0024868 3.6.4.11 - Nucleoplasmin ATPase chr1 - View
Lotus japonicus Lj5g0020197 PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 chr5 + View
Lonicera japonica Lj3A741T68 GWHAAZE00000003 - View
Lonicera japonica Lj6C597G4 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_7_66780 Lsat_1_v8_lg_7 - View
Malus domestica MD16G1187800 Homeotic gene regulator Chr16 + View
Malus domestica MD13G1186900 Homeotic gene regulator Chr13 + View
Manihot esculenta Manes.15G026000 Chromosome15 + View
Manihot esculenta Manes.03G181600 Chromosome03 - View
Medicago truncatula Medtr5g005840 chromatin remodeling factor, putative chr5 + View
Medicago truncatula Medtr1g105050 chromatin remodeling factor, putative chr1 - View
Nelumbo nucifera Nn4g26250 chr4 + View
Nelumbo nucifera Nn1g02228 chr1 + View
Petunia axillaris Peaxi162Scf00437g00634 Chromatin structure-remodeling complex subunit snf21 Peaxi162Scf00437 - View
Punica granatum PGR142G0455 NC_045128.1 + View
Prunus persica Prupe.1G154600 Pp01 + View
Pisum sativum Psat4g211240 SNF2 family N-terminal domain chr4LG4 + View
Papaver somniferum PSO170G0309 NC_039360.1 + View
Populus trichocarpa Potri.008G149900 PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 Chr08 + View
Populus trichocarpa Potri.010G091200 KOG0387 - Transcription-coupled repair protein CSB/RAD26 (contains SNF2 family DNA-dependent ATPase domain) Chr10 - View
Phaseolus vulgaris Phvul.007G054000 PTHR10799:SF640 - NUCLEAR PROTEIN STH1/NPS1 Chr07 + View
Quercus lobata QL06p003521 6 - View
Rosa chinensis RcHm_v2.0_Chr4g0417031 RcHm_v2.0_Chr4 - View
Rhododendron simsii Rhsim04G0204200 chr04 - View
Rhododendron simsii Rhsim02G0022300 chr02 + View
Striga asiatica SGA_v2.0_scaffold39G15292 scaffold39 - View
Salvia bowleyana SalBow2G2470 GWHASIU00000007 - View
Salix brachista Sabra10G0052000 GWHAAZH00000010 + View
Salix brachista Sabra08G0114000 GWHAAZH00000008 + View
Simmondsia chinensis Sc19g0004350 GWHAASQ00000019 - View
Sechium edule Sed0009592 LG04 + View
Sapria himalayana SHI00410 scaffold1_25991295 + View
Solanum lycopersicum Solyc01g079690.4 Snf2 chromatin remodeling protein (AHRD V3.3 *-* A0A1T3CE02_9HYPO) SL4.0ch01 - View
Schrenkiella parvula Sp3g04950 K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) ch3-1 - View
Schrenkiella parvula Sp6g25110 K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) ch6-6 - View
Solanum pennellii Sopen01g031470 Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress. | ATCHR12 | FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding | INVOLVED IN: response to water deprivation, response to salt stress, response to heat | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 9 growth stages | CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain , SNF2-related | BEST Arabidopsis thaliana protein match is: Homeotic gene regulator Spenn-ch01 - View
Selenicereus undatus Hund12165 Scaffold_33679 - View
Theobroma cacao Thecc.04G226600 Chromatin remodeling complex subunit Chromosome_4 + View
Tarenaya hassleriana THA.LOC104818783 probable ATP-dependent DNA helicase CHR12 NW_010966177.1 - View
Trifolium pratense TPR.G5483 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI73G0072 NC_052232.1 + View
Vaccinium macrocarpon vmacro15323 Similar to CHR12: Probable ATP-dependent DNA helicase CHR12 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G1811 CM024071.1 - View
Vitis vinifera GSVIVG01017921001 chr5 + View