Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Acer truncatum | Atru.chr1.2928 | chr1 | - | View | |
| Actinidia chinensis | Actinidia15757 | Lachesis_group27 | + | View | |
| Actinidia chinensis | Actinidia15980 | Lachesis_group9 | - | View | |
| Arabidopsis lyrata | AL2G41470 | scaffold_2 | - | View | |
| Amaranthus hybridus | Ah.01g020550 | Pre-mRNA-processing-splicing factor 8A (PRP8 homolog A) (AtPRP8A) (Protein ABNORMAL SUSPENSOR 2) (Protein EMBRYO DEFECTIVE 14) (Protein EMBRYO DEFECTIVE 177) (Protein EMBRYO DEFECTIVE 33) (Protein SUPPRESSOR OF OVEREXPRESSED FCA 81) | AmaHy_arrow1_Scaffold_1 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.DCJ864 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | arahy.Tifrunner.gnm1.Arahy.18 | + | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.B7D93H | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | arahy.Tifrunner.gnm1.Arahy.07 | - | View |
| Arabidopsis thaliana | AT1G80070 | Pre-mRNA-processing-splicing factor a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality. ABNORMAL SUSPENSOR 2 (SUS2)%3B INVOLVED IN: nuclear mRNA splicing%2C via spliceosome%3B LOCATED IN: chloroplast%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555)%2C Pre-mRNA-processing-splicing factor 8%2C U5-snRNA-binding (InterPro:IPR019581)%2C Pre-mRNA-processing-splicing factor 8 (InterPro:IPR012591)%2C PROCN (InterPro:IPR012592)%2C Pre-mRNA-processing-splicing factor 8%2C U6-snRNA-binding (InterPro:IPR019580)%2C PRP8 domain IV core (InterPro:IPR021983)%2C PRO%2C C-terminal (InterPro:IPR012984)%2C RNA recognition motif%2C spliceosomal PrP8 (InterPro:IPR019582)%3B BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor (TAIR:AT4G38780.1)%3B Has 828 Blast hits to 729 proteins in 312 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 333%3B Fungi - 220%3B Plants - 69%3B Viruses - 2%3B Other Eukaryotes - 202 (source: NCBI BLink). | Chr1 | + | View |
| Amborella trichopoda | ATR0800G142 | AmTr_v1.0_scaffold00046 | - | View | |
| Brassica napus | A07p45430 | A07 | - | View | |
| Brassica napus | A07p26500 | A07 | + | View | |
| Brassica napus | C06p54260 | C06 | - | View | |
| Brassica oleracea | BolC6t40439H | C6 | - | View | |
| Brassica rapa | BraA07t32047Z | A07 | - | View | |
| Cannabis sativa | CANSAT56G2164 | NC_044371.1 | + | View | |
| Cicer arietinum L. | Ca_01053_v3 | Ca_LG1_v3 | + | View | |
| Corylus avellana | Haze_16566 | Similar to PRP8A: Pre-mRNA-processing-splicing factor 8A (Arabidopsis thaliana OX%3D3702) | 11 | - | View |
| Citrus clementina | Ciclev10024683m.g | scaffold_7 | - | View | |
| Carpinus fangiana | Cfa001956 | Cfa01 | + | View | |
| Cardamine hirsuta | CARHR074430 | Pre-mRNA-processing-splicing factor | Chr2 | - | View |
| Carya illinoinensis | CiPaw.02G157600 | Chr02 | - | View | |
| Carya illinoinensis | CiPaw.01G248600 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Chr01 | - | View |
| Citrullus lanatus | ClCG09G002950 | Pre-mRNA-processing-splicing factor 8 | CG_Chr09 | - | View |
| Cucumis melo | MELO3C023427.2 | Pre-mRNA-processing-splicing factor, putative | chr01 | + | View |
| Chenopodium quinoa | AUR62016331 | Prpf8: Pre-mRNA-processing-splicing factor 8 | C_Quinoa_Scaffold_3514 | + | View |
| Chenopodium quinoa | AUR62011512 | Prpf8: Pre-mRNA-processing-splicing factor 8 | C_Quinoa_Scaffold_3333 | + | View |
| Capsella rubella | Carub.0002s2745 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | scaffold_2 | - | View |
| Cucumis sativus L. | CsaV3_7G032320 | pre-mRNA-processing-splicing factor 8-like | chr7 | + | View |
| Daucus carota | DCAR_025515 | hypothetical protein | DCARv2_Chr7 | - | View |
| Davidia involucrata | Dinv38126 | GWHABJS00000006 | + | View | |
| Davidia involucrata | Dinv30610 | GWHABJS00000019 | + | View | |
| Durio zibethinus | Duzib235G1417 | NW_019167982.1 | + | View | |
| Durio zibethinus | Duzib160G0553 | NW_019168015.1 | + | View | |
| Erigeron canadensis | ECA247G2936 | Conyza_canadensis_scaffold:7 | - | View | |
| Eucalyptus grandis | Eucgr.F03879 | Chr06 | - | View | |
| Erythranthe guttata | Migut.D01080 | scaffold_4 | - | View | |
| Eutrema salsugineum | Thhalv10017992m.g | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | scaffold_9 | + | View |
| Fragaria x ananassa | FAN05G4711 | PF08082//PF08083//PF10598 - PRO8NT (NUC069), PrP8 N-terminal domain (PRO8NT) // PROCN (NUC071) domain (PROCN) // RNA recognition motif of the spliceosomal PrP8 (RRM_4) | Fvb6-3 | + | View |
| Fragaria x ananassa | FAN09G3038 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Fvb6-2 | + | View |
| Fragaria x ananassa | FAN14G4930 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Fvb6-1 | + | View |
| Fragaria x ananassa | FAN02G2239 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Fvb6-4 | + | View |
| Fragaria vesca | FvH4_6g29610 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Fvb6 | - | View |
| Gossypium hirsutum | Gohir.A05G122750 | PF08083 - PROCN (NUC071) domain (PROCN) | A05 | + | View |
| Gossypium hirsutum | Gohir.D05G123700 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | D05 | + | View |
| Gossypium hirsutum | Gohir.D10G077825 | PF01398//PF08083//PF08084//PF10596//PF10597//PF10598//PF12134 - JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB) // PROCN (NUC071) domain (PROCN) // PROCT (NUC072) domain (PROCT) // U6-snRNA interacting domain of PrP8 (U6-snRNA_bdg) // U5-snRNA binding site 2 of PrP8 (U5_2-snRNA_bdg) // RNA recognition motif of the spliceosomal PrP8 (RRM_4) // PRP8 domain IV core (PRP8_domainIV) | D10 | - | View |
| Gossypium hirsutum | Gohir.A10G073101 | PTHR11140//PTHR11140:SF0 - PRE-MRNA SPLICING FACTOR PRP8 // PRE-MRNA-PROCESSING-SPLICING FACTOR 8 | A10 | + | View |
| Glycine max | Glyma.15G007100 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Gm15 | + | View |
| Glycine max | Glyma.13G366100 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Gm13 | - | View |
| Gossypium raimondii | Gorai.009G127700 | Chr09 | + | View | |
| Gossypium raimondii | Gorai.011G084400 | Chr11 | - | View | |
| Lupinus albus | Lalb_Chr24g0395471 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Lalb_Chr24 | + | View |
| Lupinus albus | Lalb_Chr14g0373851 | PTHR11140:SF0 - PRE-MRNA-PROCESSING-SPLICING FACTOR 8 | Lalb_Chr14 | - | View |
| Lotus japonicus | Lj3g0016754 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | chr3 | - | View |
| Lonicera japonica | Lj9C499G5 | GWHAAZE00000009 | + | View | |
| Lactuca sativa | Lsat_1_v5_gn_1_34320 | Lsat_1_v8_lg_1 | + | View | |
| Malus domestica | MD17G1212800 | Pre-mRNA-processing-splicing factor | Chr17 | + | View |
| Manihot esculenta | Manes.11G057400 | Chromosome11 | - | View | |
| Manihot esculenta | Manes.04G112400 | Chromosome04 | + | View | |
| Medicago truncatula | Medtr2g103960 | Pre-mRNA-processing-splicing factor 8 | chr2 | - | View |
| Nelumbo nucifera | Nn8g39518 | chr8 | - | View | |
| Punica granatum | PGR102G3099 | NC_045129.1 | + | View | |
| Prunus persica | Prupe.3G088200 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Pp03 | + | View |
| Pisum sativum | Psat5g302520 | PROCN (NUC071) domain | chr5LG3 | + | View |
| Papaver somniferum | PSO170G3007 | NC_039360.1 | - | View | |
| Populus trichocarpa | Potri.003G031900 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Chr03 | + | View |
| Phaseolus vulgaris | Phvul.005G178600 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | Chr05 | - | View |
| Quercus lobata | QL05p031390 | 5 | + | View | |
| Rosa chinensis | RcHm_v2.0_Chr2g0135211 | RcHm_v2.0_Chr2 | - | View | |
| Rhododendron simsii | Rhsim08G0212600 | chr08 | + | View | |
| Salvia bowleyana | SalBow6G5900 | GWHASIU00000002 | - | View | |
| Salvia bowleyana | SalBow6G3017 | GWHASIU00000002 | + | View | |
| Salix brachista | Sabra03G0018200 | GWHAAZH00000003 | + | View | |
| Sechium edule | Sed0021407 | LG09 | + | View | |
| Schrenkiella parvula | Sp5g35830 | K12856 - pre-mRNA-processing factor 8 (PRPF8, PRP8) | ch5-7 | + | View |
| Solanum pennellii | Sopen07g004810 | a genetic locus involved in embryogenesis. Mutations in this locus result in an abnormal suspensor and embryo lethality. | ABNORMAL SUSPENSOR 2 (SUS2) | INVOLVED IN: nuclear mRNA splicing, via spliceosome | LOCATED IN: chloroplast, membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 , Pre-mRNA-processing-splicing factor 8, U5-snRNA-binding , Pre-mRNA-processing-splicing factor 8 , PROCN , Pre-mRNA-processing-splicing factor 8, U6-snRNA-binding , PRP8 domain IV core , PRO, C-terminal , RNA recognition motif, spliceosomal PrP8 | BEST Arabidopsis thaliana protein match is: Pre-mRNA-processing-splicing factor | Spenn-ch07 | + | View |
| Selenicereus undatus | Hund00514 | Scaffold_33678 | + | View | |
| Trochodendron aralioides | TAR383G0612 | group10 | + | View | |
| Trochodendron aralioides | TAR626G1692 | group3 | - | View | |
| Trochodendron aralioides | TAR625G0212 | group4 | + | View | |
| Theobroma cacao | Thecc.06G025500 | Pre-mRNA-processing-splicing factor | Chromosome_6 | - | View |
| Tarenaya hassleriana | THA.LOC104812513 | pre-mRNA-processing-splicing factor 8A | NW_010965372.1 | - | View |
| Trifolium pratense | TPR.G37161 | Tp57577_TGAC_v2_LG7 | + | View | |
| Tripterygium wilfordii | TWI75G1620 | NC_052253.1 | - | View | |
| Vaccinium macrocarpon | vmacro19000 | Similar to PRP8A: Pre-mRNA-processing-splicing factor 8A (Arabidopsis thaliana OX%3D3702) | chr5_Vaccinium_macrocarpon_Stevens_v1 | + | View |
| Vigna mungo | VMungo1080G1733 | CM024079.1 | - | View | |
| Vitis vinifera | GSVIVG01017346001 | chr9 | - | View |