Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
CSS0049572 PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform X1 [Vitis vinifera] Chr9 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.2064 chr13 - View
Actinidia chinensis Actinidia29542 Lachesis_group7 - View
Amaranthus hybridus Ah.05g168100 AmaHy_arrow1_Scaffold_5 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RF14FM PTHR24012//PTHR24012:SF376//PTHR24012:SF432 - FAMILY NOT NAMED // POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 // HEPHAESTUS arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K61U57 PTHR24012//PTHR24012:SF432 - FAMILY NOT NAMED // HEPHAESTUS arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9CFF48 PTHR24012//PTHR24012:SF432 - FAMILY NOT NAMED // HEPHAESTUS arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LGJ4PH PTHR24012//PTHR24012:SF376 - FAMILY NOT NAMED // POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.09 + View
Arabidopsis thaliana AT1G43190 polypyrimidine tract-binding protein 3 polypyrimidine tract-binding protein 3 (PTB3)%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: regulation of RNA splicing%2C regulation of translation%3B LOCATED IN: nucleus%2C cytoplasmic mRNA processing body%2C cytoplasm%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C HnRNP-L/PTB/hephaestus splicing factor (InterPro:IPR006536)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: polypyrimidine tract-binding protein 1 (TAIR:AT3G01150.1)%3B Has 2350 Blast hits to 1929 proteins in 173 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1455%3B Fungi - 41%3B Plants - 581%3B Viruses - 0%3B Other Eukaryotes - 273 (source: NCBI BLink). Chr1 - View
Beta vulgaris EL10Ac1g01585 PTHR24012//PTHR24012:SF347 - FAMILY NOT NAMED // POLYPYRIMIDINE TRACT-BINDING PROTEIN 1 Chr1_EL10_PGA_scaffold3 + View
Cicer arietinum L. Ca_04511_v3 Ca_LG2_v3 + View
Cicer arietinum L. Ca_10675_v3 Ca_LG4_v3 - View
Corylus avellana Haze_17786 Similar to At1g43190: Polypyrimidine tract-binding protein homolog 3 (Arabidopsis thaliana OX%3D3702) 7 + View
Corylus avellana Haze_25093 Similar to At1g43190: Polypyrimidine tract-binding protein homolog 3 (Arabidopsis thaliana OX%3D3702) 8 - View
Citrus clementina Ciclev10001148m.g scaffold_5 + View
Ceratophyllum demersum CDE08G0132 6 + View
Ceratophyllum demersum CDE06G0083 4 - View
Carpinus fangiana Cfa018305 Cfa07 - View
Carpinus fangiana Cfa002795 Cfa01 - View
Carya illinoinensis CiPaw.16G009800 PTHR24012:SF432 - HEPHAESTUS Chr16 - View
Carya illinoinensis CiPaw.15G014400 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Chr15 - View
Cucumis melo MELO3C024993.2 Polypyrimidine tract-binding-like protein chr03 + View
Carica papaya Cpa.g.sc49.99 supercontig_49 - View
Chenopodium quinoa AUR62040585 At1g43190: Polypyrimidine tract-binding protein homolog 3 C_Quinoa_Scaffold_3624 - View
Chenopodium quinoa AUR62026677 At1g43190: Polypyrimidine tract-binding protein homolog 3 C_Quinoa_Scaffold_2081 - View
Cucumis sativus L. CsaV3_6G002770 Polypyrimidine tract-binding protein chr6 + View
Daucus carota DCAR_014445 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv25885 GWHABJS00000011 + View
Durio zibethinus Duzib116G0668 NW_019167949.1 + View
Durio zibethinus Duzib093G0739 NW_019167937.1 + View
Eucalyptus grandis Eucgr.F02695 Chr06 - View
Eucalyptus grandis Eucgr.F04205 Chr06 - View
Fragaria x ananassa FAN24G3173 PTHR24012//PTHR24012:SF376 - FAMILY NOT NAMED // POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Fvb2-2 - View
Fragaria x ananassa FAN20G0358 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Fvb2-3 - View
Fragaria x ananassa FAN27G0365 PTHR24012//PTHR24012:SF432 - FAMILY NOT NAMED // HEPHAESTUS Fvb2-1 + View
Fragaria x ananassa FAN15G3239 PTHR24012//PTHR24012:SF376 - FAMILY NOT NAMED // POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Fvb2-4 + View
Fragaria vesca FvH4_2g13280 PTHR24012//PTHR24012:SF376 - FAMILY NOT NAMED // POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Fvb2 + View
Gossypium hirsutum Gohir.A02G063500 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 A02 - View
Gossypium hirsutum Gohir.D02G069100 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 D02 - View
Glycine max Glyma.20G168400 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Gm20 + View
Glycine max Glyma.16G165000 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Gm16 - View
Glycine max Glyma.10G223300 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Gm10 - View
Glycine max Glyma.02G080500 KOG0106//KOG1190//KOG4206 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Polypyrimidine tract-binding protein // Spliceosomal protein snRNP-U1A/U2B Gm02 - View
Gossypium raimondii Gorai.005G078200 Chr05 - View
Lupinus albus Lalb_Chr21g0305541 K14948 - polypyrimidine tract-binding protein 2 (PTBP2, NPTB) Lalb_Chr21 + View
Lupinus albus Lalb_Chr02g0141481 PF00076//PF13893//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_5) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) Lalb_Chr02 + View
Lupinus albus Lalb_Chr19g0130191 PF13893//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_5) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) Lalb_Chr19 - View
Lotus japonicus Lj2g0008478 PTHR24012//PTHR24012:SF376 - FAMILY NOT NAMED // POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 chr2 + View
Lotus japonicus Lj5g0027187 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 chr5 + View
Lonicera japonica Lj7C377G3 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_9_41940 Lsat_1_v8_lg_9 + View
Manihot esculenta Manes.18G093400 Chromosome18 + View
Manihot esculenta Manes.02G181600 Chromosome02 + View
Medicago truncatula Medtr1g098530 polypyrimidine tract-binding-like protein chr1 - View
Nelumbo nucifera Nn1g06041 chr1 - View
Nelumbo nucifera Nn5g28791 chr5 + View
Punica granatum PGR042G1308 NC_045130.1 - View
Prunus persica Prupe.8G036700 Pp08 + View
Papaver somniferum PSO170G1597 NC_039360.1 + View
Papaver somniferum PSO541G1407 NC_039363.1 - View
Populus trichocarpa Potri.005G194700 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Chr05 + View
Populus trichocarpa Potri.002G066000 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Chr02 - View
Phaseolus vulgaris Phvul.007G081900 PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Chr07 + View
Quercus lobata QL02p037730 CM012294 - View
Quercus lobata QL06p031237 6 + View
Rosa chinensis RcHm_v2.0_Chr6g0274691 RcHm_v2.0_Chr6 + View
Salix brachista Sabra02G0052700 GWHAAZH00000002 - View
Salix brachista Sabra05G0148200 GWHAAZH00000005 + View
Selenicereus undatus Hund26682 Scaffold_2055 - View
Trochodendron aralioides TAR376G0277 group14 - View
Trochodendron aralioides TAR628G0869 group5 + View
Theobroma cacao Thecc.08G155500 Polypyrimidine tract-binding protein 3 Chromosome_8 + View
Trifolium pratense TPR.G17034 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI60G0696 NC_052246.1 - View
Tripterygium wilfordii TWI34G1705 NC_052235.1 + View
Vaccinium macrocarpon vmacro01482 Similar to At1g43190: Polypyrimidine tract-binding protein homolog 3 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0464G0875 CM024077.1 - View
Vigna mungo VMungo0720G1662 CM024071.1 - View
Vitis vinifera GSVIVG01034558001 chr18 - View